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SCNpilot_expt_1000_bf_scaffold_26554_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 4587..6095

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 510.0
  • Bit_score: 655
  • Evalue 1.10e-185
DNA ligase D n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A397_RHILW similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 510.0
  • Bit_score: 655
  • Evalue 3.70e-185
DNA ligase D {ECO:0000313|EMBL:ACI58880.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 510.0
  • Bit_score: 655
  • Evalue 5.10e-185

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
GTGTTCGACCTGCTGTTCGAGAACGGCGAAGACCTGCGCGGTCTGCCTCTACTGGAGCGGAAGGAGCGTCTCGCCGCGCTTCTTGCGCGCAAGGGCCCGCACCATCGCCAGATCAAGTATGTCGAGCATCTCTTGGAGCCGGGCGACGCGGTGCTCAAATCCGCGTGCAACCTCCAGCTCGAAGGAATCATCTCAAAGCGCGCCGATGCTCCCTACCGCTCGGGGCGCACCGAAACATGGATGAAATCCAAATGCCGCGCCGGGCATGAGGTCGTTATCGGAGGATGGAGCGGGAGCGCATCGAATCTGCGTTCTCTTGTCGTCGGCGTTTACCGCGGCGATCACCTTGTCCATACCGGGCGCGTGGGCACCGGCTTCAATGCGCGCAACACCGGCGGCATTCTCAAGCAGCTCAACGCGCTCAAGACCGACAAGAGCCCGTCCGGTGGCAAGGATGCGCCGCGCAAAGGCAAGGACTGGACTTGGGTTAAGCCCAAGCTCGTCGCCGAAATCGAATTCGCGGGGTTCACGGGCGATGGCATGGTGCGGCAGGCCGCGTTCAAGGGTCTTCGCGAAGACAAACCAGCGGGCGAAGTGCGGGCGGAAACTCCCGCGCCGCCCAAGCAGACCGAGCTGCCGACGCCTGCCCCGCGTTCGCCGCGCGTGAAAGGCGGCAGCGAAGTTGTCATGGGCGTTGCCATCTCCAAGCCTGACAAGCCGCTGTGGCCCGCGCCCGACAATTTCACCAAGCTCGATCTCGCGCGCTATCTTGAAAAAATCGGGCCGTGGATGCTGCCGCATATAAGGGGTCGTCCCTGCTCGATCATCCGCGCGCCGGACGGTATTGAAGGCGAGCGCTTCTTCCAGCGCCACGAGATGCGCGGCATGTCGAATCTCATCTCGGTGACGCAGGTCGAGGGCGACCGCAAACCTTACATCCAGATCGACCGCATTGAGGGATTGATCGCCGCCGCGCAAATTGCCGCCATCGAATTCCATCCGTGGAACAACCAACCGGGCAAACCGCCCGTGCCGGGAAGGCTTGTGTTCGACCTCGATCCCGCCGAAGGCTTGACCTTCAGCGATGTCATAGCCGCGGCGAAGGAGATGAAAGAGAGGCTCGAAGCCCTTGGCCTTGCCACCTTCTGCAAGACGACGGGCGGCAAGGGCCTTCACGTCGTCACGCCGCTGATCGTGAAAGACAAGGACGGGCTGGGCTGGGATGAAGCAAAGAGCTTCGCGCAGGCGGTTTGCGCCGCCATGGTGCAGGACAGCCCGGGCAAGTACCTGATCAACATGTCTAAGGCTAAGCGCGTCGGAAAGATCTTCCTCGACTACCTACGCAACGACCGCATGTCGACGGCGGTTGCGCCGCTATCGCCCCGGATGCGCCCCGGCGCGACGGTGTCGATGCCGCTGCACTGGAGCCAGGTCCGCAATGGGCTCGATCCCAAGCGCTTCACCATGACGACTGCACCCGCGCTGCTCGCGAAGGGCAAGCCATGGATG
PROTEIN sequence
Length: 503
VFDLLFENGEDLRGLPLLERKERLAALLARKGPHHRQIKYVEHLLEPGDAVLKSACNLQLEGIISKRADAPYRSGRTETWMKSKCRAGHEVVIGGWSGSASNLRSLVVGVYRGDHLVHTGRVGTGFNARNTGGILKQLNALKTDKSPSGGKDAPRKGKDWTWVKPKLVAEIEFAGFTGDGMVRQAAFKGLREDKPAGEVRAETPAPPKQTELPTPAPRSPRVKGGSEVVMGVAISKPDKPLWPAPDNFTKLDLARYLEKIGPWMLPHIRGRPCSIIRAPDGIEGERFFQRHEMRGMSNLISVTQVEGDRKPYIQIDRIEGLIAAAQIAAIEFHPWNNQPGKPPVPGRLVFDLDPAEGLTFSDVIAAAKEMKERLEALGLATFCKTTGGKGLHVVTPLIVKDKDGLGWDEAKSFAQAVCAAMVQDSPGKYLINMSKAKRVGKIFLDYLRNDRMSTAVAPLSPRMRPGATVSMPLHWSQVRNGLDPKRFTMTTAPALLAKGKPWM