ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4696_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 3465..4403

Top 3 Functional Annotations

Value Algorithm Source
TAXI family TRAP transporter solute receptor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP73_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 320.0
  • Bit_score: 385
  • Evalue 4.40e-104
TAXI family TRAP transporter solute receptor {ECO:0000313|EMBL:EKS42624.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 320.0
  • Bit_score: 385
  • Evalue 6.20e-104
periplasmic protein; K07080 similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 320.0
  • Bit_score: 364
  • Evalue 4.30e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAAGCGACTACTTGCGCTCACGGCCGGTATTGCTGTGGCCCTCACCGCGGCTGCCGCCATCGCGCAGACCAAGCAGCTCTCGATCACCACGGGTGGCACGGGCGGCGTGTACTATCCGCTCGGCGGCGGGTTCGCGAGCATCATCGGCAAGAACATCCCGAACACGACGGCAGCGGCGGAAGTGACCGGCGGCTCGGTTGCCANNNNNNNNNNNNNNNNNNCGCAGGTCGACGCCGCGTGGGATGCCGTCAGCGGTCTCGACAAGTTCAAGAGCGGCAAGCTGCCGGTCCAGTCGCTCGTCGTCATGTATCCGAACCATATGCACGTCGTGACCATCGACGGCACCGGCGTCACCAAGATCGAGGATCTCAAGGGCAAGCGCGTCTCCACGGGTTCGCCCGGCAGCGCCACCGAGGTGTTCGCATTCCGCGTCATCGAGGCCGCCGGTCTCGACAAGGACAAGGACATGAAGCGTGAGCGCCTCGGCGTCGCCGAGAGCGTCAACGCGATCAAGGACAAGAAGATCGACGCCTTCTTCTGGGTCGGCGGCCTTCCGACGGCGGCGGTGACCGATCTCGGCGCGACGCCCGGCACCAAGCTCCGCATGATCGACATCGCACAGAACGTCGGCAAGATGGTTGCCAAGTACGGCGAGATCTACGCGGCGACGGTCATTCCCAAGGGCACGTACGGCGGCCAGGATGCGGACAACCACAACGTCGCCGTCTGGAACGTCATGGCGGTCAACGCCAACATGCCTGAGGACCTCGCCTATCAGCTCACGAAGCTGATGCTCGAGAAGCGCGAGGATCTCGGCACCGTCCACAAGGAAGGCCTCAACATCAAGGCCGAGAACCAGACCAAGAAGAAGTCGGGCATCCCCTTCCATCCCGGTGCCCTCAAGTACTTCGCCGAGAAGGGCATCAAGGTCGACTGA
PROTEIN sequence
Length: 313
MKRLLALTAGIAVALTAAAAIAQTKQLSITTGGTGGVYYPLGGGFASIIGKNIPNTTAAAEVTGGSVAXXXXXXXQVDAAWDAVSGLDKFKSGKLPVQSLVVMYPNHMHVVTIDGTGVTKIEDLKGKRVSTGSPGSATEVFAFRVIEAAGLDKDKDMKRERLGVAESVNAIKDKKIDAFFWVGGLPTAAVTDLGATPGTKLRMIDIAQNVGKMVAKYGEIYAATVIPKGTYGGQDADNHNVAVWNVMAVNANMPEDLAYQLTKLMLEKREDLGTVHKEGLNIKAENQTKKKSGIPFHPGALKYFAEKGIKVD*