ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4696_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: 4510..6582

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGT7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 651.0
  • Bit_score: 840
  • Evalue 1.10e-240
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EKS41862.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 651.0
  • Bit_score: 840
  • Evalue 1.50e-240
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 705.0
  • Bit_score: 800
  • Evalue 5.20e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2073
ATGAGCCAGGAATTGGGGGGCGCGCCGGCTGCCACGGCGTCGAATGCCGGTGAAATCAGCGAGGACGCGCTCAAGGCCGCCGAGAAGTTCATCGAGGAGGATGAAGGCGCCCTCAATCGCGTCGGCGGCTGGATCGGCTACCTCATAGCAGCCCTCGCGATCGGCTCGACGCTGTTCCATCTCTACGCGGCCTACGACATCATCCCGACGCACGTCCTGCGGCCCGGTCACGTCGGCATCGTGCTCGTGCTGACGTTCCTGCTGTTCCCGATCGCGAGCCGCTTTCGCGACCAGATCCGCTGGTGGGACTGGCTCTTCGCCGCGGCCGGCGCCGGCACGGTCGGCTACATCCTTTATCAAGGCGCCGATTTCGGCGACTACGCGACCGCACCGACGGAAATTCAAGTGTGGGTCGGCATCGTCTTCATCGCGCTCGTTCTCGAGGCGACGCGGCGCACGACCGGCATCATCATGCCGATCGTCGCGATGGCGTTCGTGCTCTACGCGATCTACGGGCAGCACCTTCCGGCGCCGTGGACGCACCGCGGCTATGACGTCGATCGTCTCGTCGCCCATCTCTACATGACGCTCGAAGGCATCTTCGGCTCGGCCGTCGATGTCTCGTCCAGCCTCATCATTCTCTTCACGATCTTCGGCGCGGTGCTGCAGGCATCCGGCGCCGGCAAGTTCTTCATCGATTTCTCGTTCGCCGCCATGGGCGGGCGCCGCAACTCCGCCGGGCGCGCCGTCGTTCTCTCGTCCTTCCTGATGGGAGGCCCTTCCGGCTCGGGCGTCGCGACGACCGTGACCATCGGAACTGTCGCACATCCGATGCTCGCCAAATCCGGCTACGACAAGAATGCTGCGGGCGGATTGCTTGCGGCCGGCGGTCTCGGCGCGATCATCTCGCCGCCCGTGCTCGGCGCCGCGGCCTTCCTCATCGCCGAGTACCTGAAGATTTCGTACATCGAAGTTATCTGGATGGCGATCATTCCGACGCTGCTCTACTACTTCGGCATCTACGTGATGGTGGAGCTCGACGCGAAGAAGTACGGCGCCGGCGGCAGCGACCTGCTGATCGAGAAGGGAACGCTCTGGAAGCTCACCAAGGGCTACTGGTTCCACTTCCTCTCGCTCATCTCGATCGTCGTATTCATGCTGATGGGCTTCTCGCCCGTGCTCGCCGTGTTCTGGGCGACCATCATGGCGATCCTGGTCAGCTACTTCCGCTGGGATACGGCGCTCTGGCCGCGCAAGCTCGCCAAGGCCCTGACCGAGGGCACGACGGGCGTTCTCAACGTGGCGCCGACGTGCGCCGCGGCCGGCATCATCGTCGGCAGCGTGACGCTCACCGGCCTCGCGCAGAAGTTCGCCGACATCATCATCACGTACGCGGGCGGCAGTCTGATCCTCACGGCGATCTATACCTCGCTGATCGTGTGGATCGTTGGTCTCGCCGTGCCGGTGACGGCCTCCTACATCCTGTGCGCCGTCATTGCGGCGCCGGCGCTGATCAAGCTCGGCGTGCCGGACTTCGCCGCGCACATGTTCATCTTCTACTACGCGGTGCTCTCCGAGGTTTCGCCGCCGACAGCGCTCTCGCCCTTCGCGGCGGCGGCCATCACGGGCGGAAATCCCTACGCGACCACGCTGCAGTCCTGGAAGTACACGATGCCGGCCTTCCTGGTGCCGTTCGTGTTCGTCCTCGATCCGCTCGGCATCGGCCTGCTGCTCAAGTTCCCCGACGGGGCTACGTGGTTCGACATCCTGGAGATCACACTCCAGGTCGGCGCCGGCATCGCGCTGCTCGCATTCGCCTTCCAGCGCTACTATCGCGTCCGCACGAACGGCGTGGAGACGGCGCTGTTCAGCGTTGCGGGTCTTCTGCTGGTGCTGCCGACGATCGTTGCCGCCATCCTGAAGCCGATCATCGGGATCGACATCTCCGGCTACATGCCGCTCTTCCCGCAGCTTGGCGTGCACGTCGGGTACAATGTCGTGTTGGCGGTGCTGCTCTTCCTGGCCGCGCACACCATGCAGCGAACGCGCACCGTGGCACCAGCTACGGCCTGA
PROTEIN sequence
Length: 691
MSQELGGAPAATASNAGEISEDALKAAEKFIEEDEGALNRVGGWIGYLIAALAIGSTLFHLYAAYDIIPTHVLRPGHVGIVLVLTFLLFPIASRFRDQIRWWDWLFAAAGAGTVGYILYQGADFGDYATAPTEIQVWVGIVFIALVLEATRRTTGIIMPIVAMAFVLYAIYGQHLPAPWTHRGYDVDRLVAHLYMTLEGIFGSAVDVSSSLIILFTIFGAVLQASGAGKFFIDFSFAAMGGRRNSAGRAVVLSSFLMGGPSGSGVATTVTIGTVAHPMLAKSGYDKNAAGGLLAAGGLGAIISPPVLGAAAFLIAEYLKISYIEVIWMAIIPTLLYYFGIYVMVELDAKKYGAGGSDLLIEKGTLWKLTKGYWFHFLSLISIVVFMLMGFSPVLAVFWATIMAILVSYFRWDTALWPRKLAKALTEGTTGVLNVAPTCAAAGIIVGSVTLTGLAQKFADIIITYAGGSLILTAIYTSLIVWIVGLAVPVTASYILCAVIAAPALIKLGVPDFAAHMFIFYYAVLSEVSPPTALSPFAAAAITGGNPYATTLQSWKYTMPAFLVPFVFVLDPLGIGLLLKFPDGATWFDILEITLQVGAGIALLAFAFQRYYRVRTNGVETALFSVAGLLLVLPTIVAAILKPIIGIDISGYMPLFPQLGVHVGYNVVLAVLLFLAAHTMQRTRTVAPATA*