ggKbase home page

SCNpilot_expt_1000_bf_scaffold_358_curated_33

Organism: scnpilot_dereplicated_Altererythrobacter_1

near complete RP 46 / 55 BSCG 47 / 51 ASCG 10 / 38
Location: comp(34679..36019)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B592 similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 441.0
  • Bit_score: 673
  • Evalue 1.20e-190
Integrase {ECO:0000313|EMBL:AJP73673.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 441.0
  • Bit_score: 671
  • Evalue 6.10e-190
phage integrase similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 419.0
  • Bit_score: 438
  • Evalue 2.60e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGTTGAGCGACGCAAAAATCCGCGCAGCCAAGGCGCGCGACAAGGCATACAAGCTGACTGATAGCCATCGGCTCTACCTTCTGGTGAAGCCCAACGGCTCGAAGCTCTGGAAATGGAACTACGCCTACGACGGTAAGCAAAAGACGATGGCCTTCGGCATCTACCCGATGGTCAGCCTTGTGAACGCTCGTGCCAAGCGTGATGATGCCCGTGCCTTGCTCGATGAGGGGAAAGACCCGTCCGTGGTCAAGAAGCTGCGGATCGAAGCCAATCTCGAAGCAGGTCGTAATACCTTCGAGCGCGTGGCGCGCGAGTGGCATGAGAACGCAAAAGCACAATGGGCAGCAATCCATGCCGACGATGTTCTGCGTAGCCTGGAACGGGACGTGTTTCCGCTGATCGGCGATCTGCCGATCTCGGAATTGACCGCTCCCAAAATCCTTGAGGCGCTGAAAAGCATTGAGGACCGGGGCGCGATTGAAACCGCCAAGCGGGTTCGGCAGCGTATCTCCGCCGTGTTCGTTCATGCCATCGCCAAGGGCATTGCCGAAAAAGACCCCGCCGAGAAGCTGGGCGCGGTATTGAAACCGCTCCGCAAAGGACGCCAACCGGCCATCACCGATCTTGGACGTTTGCGGCAGATGATAAACGATGCCGAAGAGGATTATGCTCGCCCAATCACCCGTCTTGCACTTCGGTTGCTGGCGTTGACGGCGGTGCGGCCTAACGAAATCCGGGGTGCGCGTTGGGAGGAGTTCGAGAACCTGAATGACGCAGAGCCGCTATGGCGTATCCCGGCCGCCCGGATGAAAGGCGACGTTGAGCGCAAGAACGAGATCGGCGGCGATCATCTTGTTCCTCTGGCTCGCCAAAGCGTCGAAGTGCTGCGCGCGCTATGGCCTTTAACCGGCAGCGGCGCCTTGCTGTTCCCCAGCAATCGCCACGGTCATCGGCCTATGAGCGAGAACGCGATCGGCTATCTGCTCAACCGGGCGGGCTATCATGGGCATCACGTTCCGCATGGATTTCGTGCGGCGTTCTCGACGATTATGAACGAGTGGGCGGAGCGGAACGGCAAGAAGCATGACCGGCAAATCATCGACCTGATGCTGGCGCATGTTCCCAAGGAAAAGGTCGAAGGAGCATACAACCGGGCTGCCTATCTGGAACGGCGTCGCGAACTGGCCGTGATTTGGGCAGACAAGCTGATAGCAACCCTGCCGCCGCCAACCGTCCTTGTTCACCGGCCGGCAAAGAAAACCGGCGAGTTTTCGCGGCGGCGAGTTCCTGCTGAACTGCCAGATGATTTTCGCTTTCCGCAGGTTACGTTGGCAGGATGA
PROTEIN sequence
Length: 447
MLSDAKIRAAKARDKAYKLTDSHRLYLLVKPNGSKLWKWNYAYDGKQKTMAFGIYPMVSLVNARAKRDDARALLDEGKDPSVVKKLRIEANLEAGRNTFERVAREWHENAKAQWAAIHADDVLRSLERDVFPLIGDLPISELTAPKILEALKSIEDRGAIETAKRVRQRISAVFVHAIAKGIAEKDPAEKLGAVLKPLRKGRQPAITDLGRLRQMINDAEEDYARPITRLALRLLALTAVRPNEIRGARWEEFENLNDAEPLWRIPAARMKGDVERKNEIGGDHLVPLARQSVEVLRALWPLTGSGALLFPSNRHGHRPMSENAIGYLLNRAGYHGHHVPHGFRAAFSTIMNEWAERNGKKHDRQIIDLMLAHVPKEKVEGAYNRAAYLERRRELAVIWADKLIATLPPPTVLVHRPAKKTGEFSRRRVPAELPDDFRFPQVTLAG*