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scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1
In projects: scnpilot-dereplicated  |  SCNPILOT_EXPT_750_P  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Auto curated genome
Original version: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

Properties

Avg. coverage: 1.00 Longest contig: 28.04 Kbp Bin length: 3.86 Mbp GC content: 44.99 %
Contigs count: 907 Features count: 3853 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 3
Displaying items 451-500 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_7755_curated
Species: Alistipes finegoldii (50%)
2 4014 bp 37.39 1.00 90.96
scnpilot_expt_750_p_scaffold_43157_curated
Species: Dysgonomonas mossii (50%)
2 1260 bp 47.06 1.00 90.95
scnpilot_expt_750_p_scaffold_6535_curated
Order: Bacteroidales (83.33%)
6 4625 bp 48.45 1.00 90.94
scnpilot_expt_750_p_scaffold_11119_curated
Species: Dysgonomonas gadei (50%)
2 3032 bp 47.20 1.00 90.93
scnpilot_expt_750_p_scaffold_2998_curated
Order: Bacteroidales (61.54%)
13 9523 bp 47.99 1.00 90.89
scnpilot_expt_750_p_scaffold_7639_curated
Species: Dysgonomonas gadei (100%)
4 4060 bp 49.33 1.00 90.81
scnpilot_expt_750_p_scaffold_27800_curated
Order: Bacteroidales (50%)
4 1643 bp 43.46 1.00 90.75
scnpilot_expt_750_p_scaffold_4635_curated
Phylum: Bacteroidetes (100%)
4 6326 bp 47.68 1.00 90.72
scnpilot_expt_750_p_scaffold_14330_curated
Species: Dysgonomonas mossii (50%)
2 2525 bp 47.29 1.00 90.65
scnpilot_expt_750_p_scaffold_14629_curated
Species: Dysgonomonas gadei (50%)
4 2489 bp 47.69 1.00 90.64
scnpilot_expt_750_p_scaffold_16410_curated
Species: Bacteroides ovatus (100%)
1 2307 bp 36.97 1.00 90.64
scnpilot_expt_750_p_scaffold_10812_curated
Species: Dysgonomonas mossii (50%)
2 3085 bp 45.09 1.00 90.63
scnpilot_expt_750_p_scaffold_2917_curated
Phylum: Bacteroidetes (83.33%)
12 9838 bp 37.02 1.00 90.63
scnpilot_expt_750_p_scaffold_8637_curated
Species: Dysgonomonas gadei (50%)
4 3675 bp 46.72 1.00 90.61
scnpilot_expt_750_p_scaffold_15295_curated
Species: Dysgonomonas mossii (100%)
2 2417 bp 46.71 1.00 90.61
scnpilot_expt_750_p_scaffold_8010_curated
Species: Dysgonomonas gadei (50%)
4 3907 bp 48.63 1.00 90.61
scnpilot_expt_750_p_scaffold_8750_curated
Species: Dysgonomonas gadei (66.67%)
3 3636 bp 45.90 1.00 90.59
scnpilot_expt_750_p_scaffold_48350_curated
Species: Dysgonomonas mossii (50%)
2 1179 bp 45.38 1.00 90.59
scnpilot_expt_750_p_scaffold_45092_curated
Species: Porphyromonadaceae bacterium ING2-E5B (50%)
2 1229 bp 41.50 1.00 90.56
scnpilot_expt_750_p_scaffold_5001_curated
Order: Bacteroidales (66.67%)
6 5930 bp 43.42 1.00 90.56
scnpilot_expt_750_p_scaffold_2362_curated
Phylum: Bacteroidetes (88.89%)
9 12236 bp 46.62 1.00 90.50
scnpilot_expt_750_p_scaffold_3410_curated
Order: Bacteroidales (50%)
6 8462 bp 43.26 1.00 90.48
scnpilot_expt_750_p_scaffold_13351_curated
Species: Porphyromonadaceae bacterium ING2-E5B (50%)
2 2653 bp 46.40 1.00 90.46
scnpilot_expt_750_p_scaffold_3625_curated
Order: Bacteroidales (55.56%)
9 7963 bp 46.49 1.00 90.46
scnpilot_expt_750_p_scaffold_27648_curated
Species: Dysgonomonas gadei (50%)
4 1649 bp 39.18 1.00 90.42
scnpilot_expt_750_p_scaffold_2035_curated
Order: Bacteroidales (62.5%)
8 14224 bp 47.60 1.00 90.31
scnpilot_expt_750_p_scaffold_11976_curated
Species: Dysgonomonas mossii (66.67%)
3 2877 bp 46.05 1.00 90.30
scnpilot_expt_750_p_scaffold_8225_curated
Genus: Bacteroides (80%)
5 3828 bp 36.00 1.00 90.28
scnpilot_expt_750_p_scaffold_3192_curated
Genus: Dysgonomonas (50%)
4 8949 bp 44.32 1.00 90.24
scnpilot_expt_750_p_scaffold_34546_curated
Species: Parabacteroides goldsteinii (50%)
2 1440 bp 48.68 1.00 90.21
scnpilot_expt_750_p_scaffold_4314_curated
Order: Bacteroidales (71.43%)
7 6758 bp 46.58 1.00 90.16
scnpilot_expt_750_p_scaffold_4718_curated
Genus: Bacteroides (66.67%)
6 6220 bp 38.22 1.00 90.10
scnpilot_expt_750_p_scaffold_4013_curated
Domain: Bacteria (80%)
5 7248 bp 43.71 1.00 89.94
scnpilot_expt_750_p_scaffold_11238_curated
Species: Dysgonomonas mossii (80%)
5 3009 bp 40.05 1.00 89.93
scnpilot_expt_750_p_scaffold_3476_curated
Species: Dysgonomonas mossii (50%)
8 8290 bp 46.90 1.00 89.93
scnpilot_expt_750_p_scaffold_7423_curated
Species: Dysgonomonas mossii (50%)
6 4167 bp 46.46 1.00 89.92
scnpilot_expt_750_p_scaffold_16909_curated
Genus: Dysgonomonas (66.67%)
3 2259 bp 50.91 1.00 89.91
scnpilot_expt_750_p_scaffold_4640_curated
Species: Dysgonomonas gadei (71.43%)
7 6321 bp 48.09 1.00 89.89
scnpilot_expt_750_p_scaffold_28372_curated
Species: Dysgonomonas mossii (66.67%)
3 1622 bp 45.44 1.00 89.89
scnpilot_expt_750_p_scaffold_15499_curated
Order: Bacteroidales (50%)
4 2393 bp 46.68 1.00 89.89
scnpilot_expt_750_p_scaffold_52284_curated
Species: Paludibacter propionicigenes (50%)
2 1125 bp 45.78 1.00 89.87
scnpilot_expt_750_p_scaffold_10131_curated
Order: Bacteroidales (60%)
5 3239 bp 48.16 1.00 89.84
scnpilot_expt_750_p_scaffold_13069_curated
Species: Dysgonomonas mossii (50%)
4 2695 bp 43.71 1.00 89.83
scnpilot_expt_750_p_scaffold_15243_curated 3 2422 bp 43.35 1.00 89.80
scnpilot_expt_750_p_scaffold_2814_curated
Order: Bacteroidales (84.62%)
13 10226 bp 37.26 1.00 89.80
scnpilot_expt_750_p_scaffold_4251_curated
Order: Bacteroidales (100%)
5 6847 bp 46.53 1.00 89.78
scnpilot_expt_750_p_scaffold_5534_curated
Species: Paludibacter propionicigenes (66.67%)
6 5367 bp 47.34 1.00 89.77
scnpilot_expt_750_p_scaffold_3141_curated
Phylum: Bacteroidetes (85.71%)
7 9070 bp 47.38 1.00 89.70
scnpilot_expt_750_p_scaffold_5960_curated
Order: Bacteroidales (50%)
4 5020 bp 47.75 1.00 89.70
scnpilot_expt_750_p_scaffold_10507_curated
Species: Dysgonomonas gadei (60%)
5 3152 bp 48.16 1.00 89.66
Displaying items 451-500 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.