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scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1
In projects: scnpilot-dereplicated  |  SCNPILOT_EXPT_750_P  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Displaying items 151-200 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_34546_curated
Species: Parabacteroides goldsteinii (50%)
2 1440 bp 48.68 1.00 90.21
scnpilot_expt_750_p_scaffold_34447_curated
Species: Tannerella forsythia (100%)
1 1442 bp 50.76 1.00 99.86
scnpilot_expt_750_p_scaffold_34376_curated
Species: Dysgonomonas gadei (100%)
1 1444 bp 49.03 1.00 99.93
scnpilot_expt_750_p_scaffold_34396_curated 1 1444 bp 41.20 1.00 99.93
scnpilot_expt_750_p_scaffold_34007_curated
Species: Bacteroides fragilis (50%)
4 1453 bp 46.66 1.00 89.40
scnpilot_expt_750_p_scaffold_33980_curated
Species: Dysgonomonas gadei (50%)
2 1454 bp 45.32 1.00 92.23
scnpilot_expt_750_p_scaffold_33886_curated
Species: Dysgonomonas gadei (100%)
1 1457 bp 50.79 1.00 99.86
scnpilot_expt_750_p_scaffold_33815_curated
Species: Prevotella sp. CAG:255 (50%)
2 1459 bp 32.90 1.00 68.47
scnpilot_expt_750_p_scaffold_33622_curated
Species: Parabacteroides merdae (100%)
1 1463 bp 46.41 1.00 99.86
scnpilot_expt_750_p_scaffold_33546_curated
Species: Flavobacterium sp. EM1321 (100%)
1 1465 bp 49.56 1.00 99.93
scnpilot_expt_750_p_scaffold_33502_curated
Species: Bacteroides sp. HPS0048 (50%)
2 1466 bp 43.18 1.00 96.59
scnpilot_expt_750_p_scaffold_33351_curated
Species: Streptomyces sp. 150FB (100%)
1 1470 bp 58.64 1.00 99.80
scnpilot_expt_750_p_scaffold_33358_curated
Species: Prevotella sp. CAG:732 (100%)
1 1470 bp 45.65 1.00 99.80
scnpilot_expt_750_p_scaffold_32998_curated
Species: Dysgonomonas mossii (100%)
1 1479 bp 48.41 1.00 99.80
scnpilot_expt_750_p_scaffold_32844_curated
Species: Bacteroides sp. CAG:754 (100%)
2 1483 bp 44.50 1.00 100.13
scnpilot_expt_750_p_scaffold_32712_curated
Species: Porphyromonas sp. COT-108 OH1349 (100%)
2 1487 bp 42.43 1.00 68.59
scnpilot_expt_750_p_scaffold_32528_curated
Species: Paludibacter propionicigenes (50%)
2 1492 bp 40.35 1.00 96.51
scnpilot_expt_750_p_scaffold_32329_curated
Species: Bacteroides pyogenes (50%)
2 1497 bp 48.76 1.00 91.78
scnpilot_expt_750_p_scaffold_32346_curated
Species: Dysgonomonas gadei (100%)
2 1497 bp 40.01 1.00 91.78
scnpilot_expt_750_p_scaffold_32280_curated 3 1499 bp 46.36 1.00 95.26
scnpilot_expt_750_p_scaffold_32208_curated
Species: Barnesiella viscericola (50%)
2 1501 bp 42.97 1.00 79.75
scnpilot_expt_750_p_scaffold_31969_curated
Species: Dysgonomonas gadei (50%)
2 1508 bp 45.69 1.00 91.31
scnpilot_expt_750_p_scaffold_31913_curated
Species: Geofilum rubicundum (100%)
1 1509 bp 46.32 1.00 91.45
scnpilot_expt_750_p_scaffold_31914_curated
Species: Geofilum rubicundum (100%)
1 1509 bp 47.38 1.00 94.63
scnpilot_expt_750_p_scaffold_31805_curated
Species: RLO_Flavobacteria_35_11 (50%)
2 1512 bp 45.30 1.00 103.77
scnpilot_expt_750_p_scaffold_31508_curated
Species: Paludibacter propionicigenes (100%)
1 1521 bp 44.44 1.00 73.57
scnpilot_expt_750_p_scaffold_31428_curated
Order: Flavobacteriales (66.67%)
3 1523 bp 36.77 1.00 99.67
scnpilot_expt_750_p_scaffold_31103_curated
Species: Bacteroides sp. D1 (50%)
2 1533 bp 41.94 1.00 99.22
scnpilot_expt_750_p_scaffold_30930_curated
Species: Paludibacter propionicigenes (50%)
2 1538 bp 50.00 1.00 96.36
scnpilot_expt_750_p_scaffold_30899_curated
Order: Bacteroidales (66.67%)
3 1539 bp 45.74 1.00 79.53
scnpilot_expt_750_p_scaffold_30434_curated
Species: Dysgonomonas mossii (100%)
1 1554 bp 50.51 1.00 99.81
scnpilot_expt_750_p_scaffold_30259_curated
Order: Bacteroidales (50%)
4 1559 bp 40.09 1.00 84.09
scnpilot_expt_750_p_scaffold_30149_curated
Species: Bacteroides ovatus (100%)
1 1563 bp 63.92 1.00 99.81
scnpilot_expt_750_p_scaffold_29727_curated
Species: Pontibacter korlensis (100%)
1 1576 bp 40.10 1.00 99.94
scnpilot_expt_750_p_scaffold_29651_curated
Species: Odoribacter laneus (50%)
2 1578 bp 42.71 1.00 66.92
scnpilot_expt_750_p_scaffold_29619_curated
Species: Dysgonomonas mossii (100%)
1 1579 bp 51.04 1.00 99.94
scnpilot_expt_750_p_scaffold_29349_curated
Species: Dysgonomonas mossii (66.67%)
3 1588 bp 44.58 1.00 100.32
scnpilot_expt_750_p_scaffold_29391_curated
Species: Bacteroides xylanisolvens (50%)
2 1588 bp 43.20 1.00 98.43
scnpilot_expt_750_p_scaffold_28961_curated
Species: Bacteroides sp. HPS0048 (100%)
2 1602 bp 36.89 1.00 99.25
scnpilot_expt_750_p_scaffold_28972_curated
Species: Dysgonomonas gadei (100%)
1 1602 bp 47.94 1.00 100.00
scnpilot_expt_750_p_scaffold_28747_curated
Species: Prevotella sp. BV3P1 (50%)
2 1609 bp 47.11 1.00 99.19
scnpilot_expt_750_p_scaffold_28755_curated
Species: Dysgonomonas gadei (100%)
1 1609 bp 48.23 1.00 99.94
scnpilot_expt_750_p_scaffold_28734_curated
Species: BJP_08E140C01_Flavobacteriales_35_8 (66.67%)
3 1610 bp 38.01 1.00 96.71
scnpilot_expt_750_p_scaffold_28582_curated
Species: R_RIF_OD1_03_48_11 (50%)
2 1615 bp 34.74 1.00 93.25
scnpilot_expt_750_p_scaffold_28554_curated
Species: Dysgonomonas mossii (50%)
2 1616 bp 33.97 1.00 44.18
scnpilot_expt_750_p_scaffold_28568_curated
Species: GWC2_OP9X_49_35_curated (50%)
2 1616 bp 47.96 1.00 82.80
scnpilot_expt_750_p_scaffold_28439_curated
Species: Dysgonomonas gadei (100%)
1 1620 bp 48.77 1.00 99.81
scnpilot_expt_750_p_scaffold_28372_curated
Species: Dysgonomonas mossii (66.67%)
3 1622 bp 45.44 1.00 89.89
scnpilot_expt_750_p_scaffold_28350_curated
Species: Parabacteroides goldsteinii (100%)
1 1623 bp 48.61 1.00 82.26
scnpilot_expt_750_p_scaffold_28241_curated
Species: Dysgonomonas mossii (66.67%)
3 1627 bp 44.74 1.00 77.81
Displaying items 151-200 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.