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scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1
In projects: scnpilot-dereplicated  |  SCNPILOT_EXPT_750_P  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Displaying items 201-250 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_28215_curated
Species: Alistipes indistinctus (50%)
2 1628 bp 38.57 1.00 78.32
scnpilot_expt_750_p_scaffold_28002_curated
Species: Flavihumibacter petaseus (100%)
2 1636 bp 40.71 1.00 98.84
scnpilot_expt_750_p_scaffold_27968_curated
Order: Bacteroidales (66.67%)
3 1637 bp 47.65 1.00 77.89
scnpilot_expt_750_p_scaffold_27882_curated
Species: Geofilum rubicundum (100%)
2 1640 bp 43.66 1.00 99.15
scnpilot_expt_750_p_scaffold_27800_curated
Order: Bacteroidales (50%)
4 1643 bp 43.46 1.00 90.75
scnpilot_expt_750_p_scaffold_27777_curated
Species: Dysgonomonas gadei (50%)
2 1644 bp 43.61 1.00 84.49
scnpilot_expt_750_p_scaffold_27648_curated
Species: Dysgonomonas gadei (50%)
4 1649 bp 39.18 1.00 90.42
scnpilot_expt_750_p_scaffold_27511_curated
Species: Dysgonomonas gadei (100%)
2 1654 bp 46.67 1.00 95.04
scnpilot_expt_750_p_scaffold_27384_curated
Species: Dysgonomonas gadei (100%)
3 1659 bp 42.62 1.00 86.98
scnpilot_expt_750_p_scaffold_27275_curated
Species: Dysgonomonas gadei (50%)
4 1663 bp 41.01 1.00 83.70
scnpilot_expt_750_p_scaffold_27198_curated
Species: Flavihumibacter sp. ZG627 (100%)
2 1666 bp 43.94 1.00 72.21
scnpilot_expt_750_p_scaffold_27176_curated
Species: Dysgonomonas gadei (100%)
2 1667 bp 46.79 1.00 99.88
scnpilot_expt_750_p_scaffold_27059_curated
Species: Parabacteroides sp. HGS0025 (50%)
2 1671 bp 39.74 1.00 88.15
scnpilot_expt_750_p_scaffold_27068_curated
Species: Parabacteroides distasonis (100%)
1 1671 bp 40.22 1.00 100.00
scnpilot_expt_750_p_scaffold_26948_curated
Order: Bacteroidales (50%)
4 1676 bp 38.19 1.00 93.44
scnpilot_expt_750_p_scaffold_26904_curated
Order: Bacteroidales (66.67%)
3 1677 bp 45.50 1.00 86.40
scnpilot_expt_750_p_scaffold_26913_curated
Order: Bacteroidales (100%)
3 1677 bp 48.24 1.00 89.45
scnpilot_expt_750_p_scaffold_26815_curated
Species: Bacteroides vulgatus (50%)
2 1681 bp 46.34 1.00 95.84
scnpilot_expt_750_p_scaffold_26652_curated
Species: Paludibacter propionicigenes (100%)
3 1687 bp 47.36 1.00 99.59
scnpilot_expt_750_p_scaffold_26587_curated
Species: Dysgonomonas gadei (66.67%)
3 1689 bp 44.76 1.00 79.22
scnpilot_expt_750_p_scaffold_26583_curated
Species: Bacteroides sp. CAG:189 (50%)
2 1690 bp 34.20 1.00 76.86
scnpilot_expt_750_p_scaffold_26265_curated
Species: Dysgonomonas gadei (50%)
2 1701 bp 49.09 1.00 95.59
scnpilot_expt_750_p_scaffold_26220_curated
Order: Bacteroidales (66.67%)
3 1703 bp 41.57 1.00 81.39
scnpilot_expt_750_p_scaffold_26112_curated
Genus: Bacteroides (75%)
4 1708 bp 33.78 1.00 65.52
scnpilot_expt_750_p_scaffold_26001_curated
Species: Bacteroides graminisolvens (50%)
2 1712 bp 38.43 1.00 91.12
scnpilot_expt_750_p_scaffold_25925_curated
Species: Dysgonomonas mossii (50%)
2 1715 bp 43.09 1.00 70.67
scnpilot_expt_750_p_scaffold_25753_curated
Species: Bacteroides sp. HPS0048 (100%)
2 1722 bp 42.45 1.00 98.43
scnpilot_expt_750_p_scaffold_25737_curated
Species: Chlamydia sp. 'Rubis' (100%)
1 1723 bp 31.17 1.00 72.26
scnpilot_expt_750_p_scaffold_25692_curated
Species: Dysgonomonas gadei (100%)
3 1725 bp 46.38 1.00 81.74
scnpilot_expt_750_p_scaffold_25673_curated
Species: Dysgonomonas gadei (100%)
4 1726 bp 34.36 1.00 68.66
scnpilot_expt_750_p_scaffold_25374_curated
Species: Prevotella buccae (50%)
2 1738 bp 47.24 1.00 98.39
scnpilot_expt_750_p_scaffold_25378_curated
Species: Dysgonomonas gadei (100%)
2 1738 bp 48.73 1.00 97.70
scnpilot_expt_750_p_scaffold_25250_curated
Species: CG_Paludi_01 (50%)
2 1744 bp 40.65 1.00 69.84
scnpilot_expt_750_p_scaffold_24901_curated
Species: Dysgonomonas gadei (100%)
3 1760 bp 47.33 1.00 91.88
scnpilot_expt_750_p_scaffold_24868_curated
Species: Dysgonomonas gadei (100%)
2 1761 bp 47.47 1.00 93.36
scnpilot_expt_750_p_scaffold_24848_curated
Species: Dysgonomonas mossii (100%)
1 1762 bp 48.13 1.00 99.94
scnpilot_expt_750_p_scaffold_24768_curated
Species: Dysgonomonas gadei (100%)
1 1766 bp 48.58 1.00 96.66
scnpilot_expt_750_p_scaffold_24720_curated
Species: Dysgonomonas gadei (50%)
2 1769 bp 45.00 1.00 80.72
scnpilot_expt_750_p_scaffold_24723_curated
Phylum: Bacteroidetes (100%)
3 1769 bp 41.10 1.00 65.12
scnpilot_expt_750_p_scaffold_24677_curated
Species: Dysgonomonas gadei (50%)
2 1770 bp 49.94 1.00 96.44
scnpilot_expt_750_p_scaffold_24698_curated
Genus: Parabacteroides (100%)
3 1770 bp 48.98 1.00 95.76
scnpilot_expt_750_p_scaffold_24637_curated
Species: Dysgonomonas mossii (66.67%)
3 1773 bp 44.78 1.00 87.14
scnpilot_expt_750_p_scaffold_24502_curated
Class: Bacteroidia (66.67%)
3 1779 bp 48.29 1.00 89.04
scnpilot_expt_750_p_scaffold_24378_curated
Species: Dysgonomonas gadei (50%)
2 1784 bp 45.18 1.00 73.15
scnpilot_expt_750_p_scaffold_24346_curated
Species: Bacteroides sp. CAG:530 (100%)
1 1786 bp 42.39 1.00 93.39
scnpilot_expt_750_p_scaffold_24199_curated
Species: Dysgonomonas mossii (100%)
1 1792 bp 49.16 1.00 99.94
scnpilot_expt_750_p_scaffold_23951_curated
Genus: Dysgonomonas (66.67%)
3 1803 bp 45.48 1.00 89.52
scnpilot_expt_750_p_scaffold_23924_curated
Species: Dysgonomonas gadei (66.67%)
3 1804 bp 44.62 1.00 87.97
scnpilot_expt_750_p_scaffold_23919_curated
Species: Dysgonomonas gadei (50%)
4 1805 bp 46.59 1.00 83.10
scnpilot_expt_750_p_scaffold_23751_curated
Species: Dysgonomonas gadei (100%)
2 1812 bp 45.81 1.00 78.81
Displaying items 201-250 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.