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SCNpilot_expt_1000_bf_scaffold_49_curated_66

Organism: scnpilot_dereplicated_Bacteroidetes_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: comp(76393..76692)

Top 3 Functional Annotations

Value Algorithm Source
ribosome hibernation protein yhbh n=1 Tax=Niabella aurantiaca RepID=UPI00036A24E5 similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 99.0
  • Bit_score: 143
  • Evalue 1.60e-31
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 96.0
  • Bit_score: 142
  • Evalue 8.50e-32
Putative sigma-54 modulation protein {ECO:0000313|EMBL:ACU59195.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 96.0
  • Bit_score: 142
  • Evalue 3.80e-31

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGAACGTTCAAATTCAAGCAGTTCATTTCGAAGCAGATAACAGGTTACTGGAACATGTGAACAGGAAGATCGAAAAGCTGAGTACTTTTCACGATAAGATCATCGGCGTAGAGGTATACCTGGTATTGGATAATATAGTACACAATATTAAAGACAAGGTTGCGGAAATAAAGGTGTATGTTCCGAAACACTCCTTCTTTGTAAAACACCAGTCCAAAACCTTTGAAGAGTCTTTTGACCTTGCGTTCGATTCTATGGTAAACCGTATCAAACGTCAGAAACAAAAAGCAGTTGCTTAG
PROTEIN sequence
Length: 100
MNVQIQAVHFEADNRLLEHVNRKIEKLSTFHDKIIGVEVYLVLDNIVHNIKDKVAEIKVYVPKHSFFVKHQSKTFEESFDLAFDSMVNRIKRQKQKAVA*