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SCNpilot_expt_1000_bf_scaffold_49_curated

Search features with annotation key words

Displaying items 61-90 of 536 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_49_curated_61
unknown

Not on your lists

70778..71140
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_49_curated_62
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(71141..72739)
DNA (1599bp) protein (533aa)
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ3_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_49_curated_63
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(72806..74440)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L5D3_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KGE88625.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_49_curated_64
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

74488..74982
DNA (495bp) protein (165aa)
Thiol-disulfide isomerase-like thioredoxin id=2805240 bin=GWF2_Bacteroidetes_49_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
alkyl hydroperoxide reductase
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_expt_1000_bf_scaffold_49_curated_65
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(75113..76267)
DNA (1155bp) protein (385aa)
PQQ repeat protein n=2 Tax=Arthrospira platensis RepID=D5A6C9_ARTPN
PQQ repeat protein
PQQ repeat protein {ECO:0000313|EMBL:BAI93762.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_66
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76393..76692)
DNA (300bp) protein (100aa)
ribosome hibernation protein yhbh n=1 Tax=Niabella aurantiaca RepID=UPI00036A24E5
sigma-54 modulation protein; K05808 putative sigma-54 modulation protein
Putative sigma-54 modulation protein {ECO:0000313|EMBL:ACU59195.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_67
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(76732..77646)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364BF1F
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
integrase family protein; K03733 integrase/recombinase XerC
SCNpilot_expt_1000_bf_scaffold_49_curated_68
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77714..77911)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF3_CHIPD
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_69
unknown

Not on your lists

78091..78627
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_49_curated_70
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

78637..79224
DNA (588bp) protein (196aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:CAL44438.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CAL44438.1};; TaxID=402612 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).;"
Riboflavin synthase, alpha subunit n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H264_FLAPJ
SCNpilot_expt_1000_bf_scaffold_49_curated_71
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79249..80394
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373BD2B
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU63377.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_72
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80395..80952)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABC65
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03305.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_73
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81057..81437)
DNA (381bp) protein (127aa)
HxlR family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00036998CC
HxlR family transcriptional regulator {ECO:0000313|EMBL:KIA87702.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
HxlR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_49_curated_74
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

81538..81915
DNA (378bp) protein (126aa)
DoxX-like family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3V1W6_9LEPT
DoxX-like family protein {ECO:0000313|EMBL:GAL84494.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_49_curated_75
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82246..82533)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU47_CHIPD
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_76
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82542..83168)
DNA (627bp) protein (209aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379BCD2
SCNpilot_expt_1000_bf_scaffold_49_curated_77
unknown

Not on your lists

comp(83286..84173)
DNA (888bp) protein (296aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_49_curated_78
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84283..84666
DNA (384bp) protein (128aa)
Ribosome-binding factor A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PES0_CHIPD
ribosome-binding factor A; K02834 ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_79
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84667..85899
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PER9_CHIPD
hypothetical protein; K09808 lipoprotein-releasing system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57891.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_80
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(85902..87701)
DNA (1800bp) protein (600aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI
SCNpilot_expt_1000_bf_scaffold_49_curated_81
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


87957..88229
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL12_CHIPD
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_82
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

88302..90710
DNA (2409bp) protein (803aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL11_CHIPD
SCNpilot_expt_1000_bf_scaffold_49_curated_83
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

90819..91754
DNA (936bp) protein (312aa)
Uncharacterized protein id=3619436 bin=GWA2_Bacteroidetes_33_15 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
regulator of cell autolysis
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_expt_1000_bf_scaffold_49_curated_84
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(92099..98080)
DNA (5982bp) protein (1994aa)
PKD domain containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9Z7_CHIPD
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ACU59234.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_85
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(98587..100161)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01717.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_86
unknown

Not on your lists

100280..100795
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_49_curated_87
unknown

Not on your lists

comp(100870..101286)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_49_curated_88
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(101395..102282)
DNA (888bp) protein (296aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAE2_CHIPD
Ppx/GppA phosphatase {ECO:0000313|EMBL:ACU61146.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_49_curated_89
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(102279..104357)
DNA (2079bp) protein (693aa)
polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Polyphosphate kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAE3_CHIPD
SCNpilot_expt_1000_bf_scaffold_49_curated_90
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(104434..104928)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368EA9D
cytidyltransferase-related domain-containing protein
Tax=GWF2_Bacteroidetes_35_48_curated
Displaying items 61-90 of 536 in total

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