ggKbase home page

SCNpilot_cont_300_bf_scaffold_4745_curated_4

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 1293..2159

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 269.0
  • Bit_score: 520
  • Evalue 1.50e-144
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 269.0
  • Bit_score: 490
  • Evalue 2.80e-136
DNA-directed RNA polymerase subunit alpha n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD4_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 269.0
  • Bit_score: 520
  • Evalue 1.10e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGATCGAAAGAAACTGGCAAGAGCTGATCCGTCCCGAGAAACCGCAAGTCGAGGGCGGGTCTGACCCGCAGCACAAGGCGCGTCTGATCGCCGAGCCTCTCGAGCGCGGTTTCGGTGTGACGCTCGGCAACGCGCTTCGTCGCGTTCTGCTGTCTTCGCTTCAAGGCGCGGCGGTCACGGCCATTCAGATCGACGGCGTTGTTCACGAGTTCTCGTCGCTGGAAGGCGTTCGCGAGGACGTCGTCGACATCGTTCTGAACATCAAGCAACTGGCCCTGCGCATGCACGCGGAAGGCCCGAAGCGGATGACGCTGCGCGCCACGGGCCCTGGCCCGGTGACCGCGGCCCAGATCGACCTGCCGGCCGACATCGAGGTGCTGAACCCGGATCACGTGATCTGCACCCTGGACGACGGCGCTTCGGTTCGCATGGAACTGACGGTGCAGAACGGCAAGGGCTACGTCGCCGCCGAACTGAACCGCCCGGAAGACGCCCCGATCGGTCTGATCGCCGTCGACGCCCTGTATTCGCCGGTGAAGCGCGTCGCCTATCGCGTCGAGCCGACCCGTCAGGGCCAGTCGCTGGACTACGACAAGCTGATCCTGGAAGTCGAAACCAACGGTGCCGTCTCGCCGGTTGACGCTGTGGCTTACGCTGCGCGCATCCTGCAAGACCAGCTACAGATCTTCATCACCTTCGATGAGCCGACCAAGGCTGTCGAGCAGTCGGACGGCAAGCCCGAACTGCCCTTCAACCCGTCGCTGCTGAAGAAGGTGGACGAGCTGGAGCTGTCGGCCCGTNNNNNNNNNNNNNGAAGACCGAGGGCGAAATGCTTCGCACCCCGAACTTCGGCCGCAAGTCGCTGA
PROTEIN sequence
Length: 289
MIERNWQELIRPEKPQVEGGSDPQHKARLIAEPLERGFGVTLGNALRRVLLSSLQGAAVTAIQIDGVVHEFSSLEGVREDVVDIVLNIKQLALRMHAEGPKRMTLRATGPGPVTAAQIDLPADIEVLNPDHVICTLDDGASVRMELTVQNGKGYVAAELNRPEDAPIGLIAVDALYSPVKRVAYRVEPTRQGQSLDYDKLILEVETNGAVSPVDAVAYAARILQDQLQIFITFDEPTKAVEQSDGKPELPFNPSLLKKVDELELSARXXXXXRPRAKCFAPRTSAASR*