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SCNpilot_cont_300_bf_scaffold_4745_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4745_curated_1
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..288
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037B61DC
Energy transducer TonB {ECO:0000313|EMBL:KIC54128.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
TonB protein; K03832 periplasmic protein TonB
SCNpilot_cont_300_bf_scaffold_4745_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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430..798
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD2_BREDI
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_cont_300_bf_scaffold_4745_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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815..1204
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=2 Tax=Brevundimonas diminuta RepID=F4QZD3_BREDI
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_cont_300_bf_scaffold_4745_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1293..2159
DNA (867bp) protein (289aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD4_BREDI
SCNpilot_cont_300_bf_scaffold_4745_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2123..2272
DNA (150bp) protein (50aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD4_BREDI
SCNpilot_cont_300_bf_scaffold_4745_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2387..2806
DNA (420bp) protein (140aa)
50S ribosomal protein L17 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD5_BREDI
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_cont_300_bf_scaffold_4745_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2905..3378
DNA (474bp) protein (158aa)
Acetyltransferase GNAT family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD6_BREDI
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:EGF94018.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_300_bf_scaffold_4745_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3386..4249)
DNA (864bp) protein (288aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD7_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF94019.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4745_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4246..5145)
DNA (900bp) protein (300aa)
Bacitracin transport ATP-binding protein bcrA n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD8_BREDI
Bacitracin transport ATP-binding protein bcrA {ECO:0000313|EMBL:EGF94020.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ABC transporter
SCNpilot_cont_300_bf_scaffold_4745_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5249..6484
DNA (1236bp) protein (412aa)
phosphodiesterase I (EC:3.1.4.1)
Phosphodiesterase I/nucleotide pyrophosphatase beta n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD9_BREDI
Phosphodiesterase I/nucleotide pyrophosphatase beta {ECO:0000313|EMBL:EGF94021.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_4745_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6554..7108
DNA (555bp) protein (185aa)
Tetracycline resistance protein, class A n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZE1_BREDI
Tetracycline resistance protein, class A {ECO:0000313|EMBL:EGF94023.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
putative tetracycline-efflux transporter; K08151 MFS transporter, DHA1 family, tetracycline resistance protein
Displaying 11 items

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