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SCNpilot_cont_300_bf_scaffold_4745_curated_5

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 2123..2272

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 103
  • Evalue 7.50e-20
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 49.0
  • Bit_score: 102
  • Evalue 4.90e-20
DNA-directed RNA polymerase subunit alpha n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZD4_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 103
  • Evalue 5.30e-20

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 150
ATGCTTCGCACCCCGAACTTCGGCCGCAAGTCGCTGAACGAAATCAAGGAAGTTCTGGCGTCCATGGGCCTGAGCCTCGGCATGGACGTGCCGAACTGGCCGCCGGAAAACATCGAAGATCTGGCCAAGAAGTTCGACGACCAGATCTGA
PROTEIN sequence
Length: 50
MLRTPNFGRKSLNEIKEVLASMGLSLGMDVPNWPPENIEDLAKKFDDQI*