name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_283_curated_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..177)
|
Putative beta-oxoacyl-CoA thiolase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P604_AROAE
beta-oxoacyl-CoA thiolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_2
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(236..964)
|
Transcriptional regulator, GntR family n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P605_AROAE
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAI07256.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_3 |
Not on your lists |
1118..3205
|
Acetoacetyl-CoA synthetase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HTG9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKO08941.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acetoacetyl-CoA synthetase
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria
|
Not on your lists |
3438..4457
|
Putative lipolytic enzyme n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7E6_AROAE
lipolytic enzyme
Tax=RBG_16_RIF_CHLX_72_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_5
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4509..5822)
|
D-amino acid dehydrogenase small subunit; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202, ECO:0000256|SAAS:SAAS00014770};; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
D-amino acid dehydrogenase small subunit n=1 Tax=Azoarcus toluclasticus RepID=UPI0003670C0F
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_6
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5939..6442
|
Leucine-responsive regulatory protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B274_PSEAC
Lrp protein {ECO:0000313|EMBL:AJE23125.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
AsnC family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6439..7398
|
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:ABM42443.1}; EC=3.4.17.13 {ECO:0000313|EMBL:ABM42443.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W868_ACISJ
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_8
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7442..8632)
|
Putative hydrolase YxeP {ECO:0000313|EMBL:EWS57079.1}; EC=3.-.-.- {ECO:0000313|EMBL:EWS57079.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
amidohydrolase n=1 Tax=Caldimonas manganoxidans RepID=UPI000363497D
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_9
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8721..9890
|
Putative zinc protease protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WEK2_RALSL
Putative zinc protease protein {ECO:0000313|EMBL:CCF98223.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
zinc protease protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_10
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9976..11673
|
fadD3; Long-chain-fatty-acid--CoA ligase (EC:2.3.1.86); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:CAJ94362.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CAJ94362.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
Long-chain-fatty-acid-CoA ligase n=2 Tax=Burkholderiaceae RepID=Q0K6K9_CUPNH
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11742..13355)
|
Probable acid-coenzyme A ligase n=2 Tax=Bordetella bronchiseptica RepID=K0N2X3_BORBM
acid-coenzyme A ligase
Benzoate-CoA ligase family {ECO:0000313|EMBL:KDD57194.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_12
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
comp(13390..13923)
|
MarR family transcriptional regulator n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PTT4_MEIRD
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AGK05684.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14114..15208)
|
outer membrane protein (porin) id=12494216 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
outer membrane porin protein BP0840-like
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15410..16057
|
coq7; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Coq7 (EC:1.14.13.-); K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00231964};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMB4_RUBGI
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_15
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16075..16497)
|
peroxiredoxin n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000370FBC9
regulator of disulfide bond formation, redox protein; K07397 putative redox protein
Regulator of disulfide bond formation, redox protein {ECO:0000313|EMBL:ADJ65329.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_16
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17132..17560
|
50S ribosomal protein L13 n=5 Tax=Ralstonia RepID=RL13_RALPJ
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17565..17957
|
30S ribosomal protein S9 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D65815
rpsI; 30S ribosomal protein S9/S16; K02996 small subunit ribosomal protein S9
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18072..19133
|
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037D9398
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_19
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19186..19878
|
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUP0_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR91099.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_20
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19920..20321
|
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HQL6_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_21
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20383..20730
|
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Ralstonia sp. PBA RepID=I9W4A9_9RALS
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
erpA; putative iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20855..21973)
|
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3F1_ACIAP
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_23
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21999..23345)
|
endopeptidase (EC:3.4.24.75)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E45EA7
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EJL83374.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_24
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23537..24787
|
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
Tyrosine--tRNA ligase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HW86_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_25
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24886..25335
|
D-aminoacyl-tRNA deacylase {ECO:0000255|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000255|HAMAP-Rule:MF_00518};; D-tyrosyl-tRNA(Tyr) deacylase; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=DTD_AROAE
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_26
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25460..26086
|
Phospholipid-binding protein, PBP family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47I68_DECAR
Putative kinase inhibitor protein {ECO:0000313|EMBL:EXI69307.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
PBP family phospholipid-binding protein; K06910
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_27
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26200..26811
|
gpmB; phosphoglycerate mutase 2 protein (EC:5.4.2.1); K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000305810D
Phosphoglycerate mutase {ECO:0000313|EMBL:ESJ09979.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_28
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27084..28328
|
glyA; serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Serine hydroxymethyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHL4_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_29
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28504..28968
|
NrdR family transcriptional regulator n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030359AB
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28998..30704)
|
ilvG; acetolactate synthase 2 large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase isozyme 2 large subunit IlvG n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PPE1_9BURK
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KGF82690.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
|