name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_283_curated_31
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30759..31859
|
ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase (EC:3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7N9_AROAE
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_32
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31863..32492
|
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase subunit alpha n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GXQ7_9BURK
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:ESH93045.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_33
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32476..32970)
|
Putative uncharacterized protein n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QJ51_METS6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_34
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33054..34175
|
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
ribAB; riboflavin biosynthesis bifunctional protein: GTP cyclohydrase II AND 3,4-dihydroxy-2-butone-4-phosphate synthase (DHBP synthase) (EC:3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis bifunctional protein: GTP cyclohydrase II AND 3,4-Dihydroxy-2-butone-4-phosphate synthase (DHBP synthase) n=1 Tax=Ralstonia syzygii R24 RepID=G3A5R8_9RALS
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_35
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34172..34813
|
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholde
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5BXC9_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_36
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34810..35301
|
N utilization substance protein B homolog n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8N6Z4_RALSL
nusB; antitermination factor (N utilization substance B) (transcriptional antiterminator)
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_37
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35318..36274
|
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128, ECO:0000313|EMBL:CBJ41995.1};; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
Thiamine-monophosphate kinase n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NNU5_RALSL
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_38
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36219..36767
|
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
pgpA; phosphatidylglycerophosphatase A (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27]
phosphatidylglycerophosphatase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003197CC2
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_39
R_Proteobacteria_53_8, Proteobacteria, Bacteria
|
Not on your lists |
36755..37288
|
Damage inducible protein CinA n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YYK0_9RHOO
cinA1; competence/damage inducible protein CinA; K03743
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_40
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37355..38425
|
Protein RecA n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RU64_9BURK
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
recA; RecA protein; K03553 recombination protein RecA
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_41
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38553..39023
|
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000363E408
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
recX; recombination protein RecX; K03565 regulatory protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_42
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39209..39781
|
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D7FBF
Uncharacterized protein {ECO:0000313|EMBL:KGF80437.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_43
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39778..40941
|
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Burkholderia sp. H160 RepID=B5WK26_9BURK
succinyl-CoA synthetase subunit beta
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_44
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40956..41837
|
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X9K2_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_45
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
41851..42576
|
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JDY0_ALCFA
Uncharacterized protein {ECO:0000313|EMBL:EJC61924.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_46
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42749..43387
|
signal peptide protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B8C66
fha domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ACM34815.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_47
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
43411..45438
|
putative transmembrane sensor domain protein; K01768 adenylate cyclase [EC:4.6.1.1]
CHASE2 domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RU69_9BURK
CHASE2 domain protein {ECO:0000313|EMBL:EFV95852.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_48
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
45413..46177
|
Metallo-beta-lactamase domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RU70_9BURK
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFV95853.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
beta-lactamase domain protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_49
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(46215..46499)
|
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WR39_VEREI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI95103.1}; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 5216-82.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_50
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
46906..47328
|
Type IV pilin structural subunit n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HYK6_PSEUO
Competence protein {ECO:0000313|EMBL:ETM65706.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
Fimbrial protein pilin; K02650 type IV pilus assembly protein PilA
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_51
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
48025..49392
|
Putative sulfatase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HXR1_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:CDF86063.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_52
unknown
|
Not on your lists |
49396..50652
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_283_curated_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(50842..51531)
|
thiamine-phosphate diphosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=THIE_CHRVO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_54
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
51720..51908
|
Rubredoxin n=2 Tax=Methylovorus RepID=C6XBR6_METSD
rubredoxin-type fe(cys)4 protein
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_55
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
51910..52335
|
Response regulator receiver domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RU73_9BURK
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EXI91087.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
response regulator receiver; K02657 twitching motility two-component system response regulator PilG
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_56
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
52380..52748
|
Twitching motility protein PilH n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W3K3_9BURK
Twitching motility protein PilH {ECO:0000313|EMBL:EGF30563.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
pilH; twitching motility protein. pilH ortholog; K02658 twitching motility two-component system response regulator PilH
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_57
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
52751..53269
|
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000319EE91
Twitching motility protein PilI {ECO:0000313|EMBL:KIF81090.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
pilI; PilI twitching motility protein; K02659 twitching motility protein PilI
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_58
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
53292..55568
|
Putative twitching motility transmembrane protein PilJ-like n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G8M4_HERAR
pilJ; twitching motility transmembrane protein; K02660 twitching motility protein PilJ
Putative twitching motility transmembrane protein PilJ-like {ECO:0000313|EMBL:CAL62861.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_59
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
55612..61512
|
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BFACB
Chemotaxis protein CheA {ECO:0000313|EMBL:AJW44553.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
|
|
SCNpilot_expt_1000_bf_scaffold_283_curated_60
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
61541..62110
|
UPF0301 protein RSIPO_02325 n=5 Tax=Ralstonia solanacearum RepID=B5SH41_RALSL
transcriptional regulator; K07735 putative transcriptional regulator
UPF0301 protein RCFBP_20740 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
|