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SCNpilot_expt_1000_bf_scaffold_283_curated_60

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 61541..62110

Top 3 Functional Annotations

Value Algorithm Source
UPF0301 protein RSIPO_02325 n=5 Tax=Ralstonia solanacearum RepID=B5SH41_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 182.0
  • Bit_score: 267
  • Evalue 1.10e-68
transcriptional regulator; K07735 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 182.0
  • Bit_score: 267
  • Evalue 3.30e-69
UPF0301 protein RCFBP_20740 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 182.0
  • Bit_score: 267
  • Evalue 1.50e-68

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGGCGCCCAGACCGTCTCCAACCTGACCAACCAGTTCCTGATCGCCATGCCCGACATGGCGGATCCGAACTTCGGCGGCACCGTCGTGTTCGTGGTCGAGCACAACGAGAAGGGTGCCCTTGGCTTGGTCATCAACCGGCCGATGGAGATCGATCTGGCCACGCTGTTCGAGCGCATCGATCTCAAGCTCGAGATCGCGCCGCTGGCCGGTTCGCCGGTGTTCTTCGGGGGGCCGGTCCAGATGGACCGCGGCTTCGTGCTGCACCAGCCGGTCGGCGAATGGAACTCCACGGTCGCGGTCGGCGACGAACTCGGCCTCACGTCGTCCAAGGACGTACTCGAGGCGGTCGCCGACGGGGGCGGCCCGCGCCGGATGCTGGTCACGCTCGGCTACGCGGGCTGGGGCCCCGGGCAGCTCGAGGAGGAAATCTCGCGCAACGCCTGGCTCACGGCACCGGCCGACGCCGATCTCATCTTCGATACGCCGGCCGACGAACGCTTCATGGCGGCGTTCCGTCTCCTCGGCATCGATCCGGCGTTCCTCGCCACCTCGGCCGGCCACGCTTGA
PROTEIN sequence
Length: 190
MGAQTVSNLTNQFLIAMPDMADPNFGGTVVFVVEHNEKGALGLVINRPMEIDLATLFERIDLKLEIAPLAGSPVFFGGPVQMDRGFVLHQPVGEWNSTVAVGDELGLTSSKDVLEAVADGGGPRRMLVTLGYAGWGPGQLEEEISRNAWLTAPADADLIFDTPADERFMAAFRLLGIDPAFLATSAGHA*