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SCNpilot_expt_1000_bf_scaffold_283_curated_57

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 52751..53269

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000319EE91 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 169.0
  • Bit_score: 147
  • Evalue 1.10e-32
Twitching motility protein PilI {ECO:0000313|EMBL:KIF81090.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 176.0
  • Bit_score: 146
  • Evalue 3.50e-32
pilI; PilI twitching motility protein; K02659 twitching motility protein PilI similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 171.0
  • Bit_score: 137
  • Evalue 3.60e-30

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCCGATCGCAAGAACCTGCGCGAGTTCCAGGCCCGGCTGTCGGAGCGGCTGCGCCAGGCCGCTTCCGGCCCGCCGCAATCGGCGCGCCTGGGCGTGCAGGTCGGCGCGCGACGCCTGCTGGTCGACCTGTCGGACGCCGGCGAGATCGTGGCGCTGAACCGGGGGATCACGCCGGTGCCGCTCACGCAGGAGTGGTTCCGCGGCCTGGTGAACCTGCGCGGTTCGCTGTACGGCGTTTCCGATCTCGCGCGCTTCGAGGGGCACGAGCCGGCGCCGGTGACGAAGGCGACGCGGCTTCTCGCGTTCTCCTCGCGGCTGAATCTCAATGGCGCGATCGTGGTCGATCGCATGCTGGGGCTGCAGAACACCGCGGCGATGACCGAGGCGGCTGCGGGCGACGAGCCCAAGCCGTCGTGGCTGGGTCGCCACTGGGTCGATGGCGAGAGCCACCGATGGACGGAGCTGAGACTCGAGGAGCTGGCGGGCGACGAGCGATTCCTCGCGGTGAATCGCTGA
PROTEIN sequence
Length: 173
MADRKNLREFQARLSERLRQAASGPPQSARLGVQVGARRLLVDLSDAGEIVALNRGITPVPLTQEWFRGLVNLRGSLYGVSDLARFEGHEPAPVTKATRLLAFSSRLNLNGAIVVDRMLGLQNTAAMTEAAAGDEPKPSWLGRHWVDGESHRWTELRLEELAGDERFLAVNR*