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SCNpilot_expt_1000_bf_scaffold_283_curated_50

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 46906..47328

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilin structural subunit n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HYK6_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 132.0
  • Bit_score: 180
  • Evalue 1.60e-42
Competence protein {ECO:0000313|EMBL:ETM65706.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 132.0
  • Bit_score: 180
  • Evalue 2.30e-42
Fimbrial protein pilin; K02650 type IV pilus assembly protein PilA similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 136.0
  • Bit_score: 166
  • Evalue 4.50e-39

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGATGAAGATGAGCAGGCAGATGCAGAAGGGTTTCACCCTGATCGAGTTGATGATCGTTGTGGCGATCATCGGCATTCTGGCGGCGGTGGCGCTGCCGGCGTATCAGGACTACACGGTGCGGGCGCGGGTCAGCGAAGGTCTGTCGCTCGCGAGTGGCGCGAAGGTCACCGTCGCCGAGAACATTGCCAACGACGGCGCCACGACCAATGCCTGCCGTGGGGTGAACACGGCTGTCGGCGGTCATGTGGCGACCTTGGCGTGCGCCACGGGCACGCTTACCGTGACGATGGACACTACAGCGAAGGGCGTTGCCCTCACGCTCACGCCGGGCACGCCCGGCAGCGGTCCGGTGGCTTGGACCTGCGCCGTCACCAGTAACGCCAACAACAAGTACGTCCCTGCGGAATGCCGCATCCCCTGA
PROTEIN sequence
Length: 141
MMKMSRQMQKGFTLIELMIVVAIIGILAAVALPAYQDYTVRARVSEGLSLASGAKVTVAENIANDGATTNACRGVNTAVGGHVATLACATGTLTVTMDTTAKGVALTLTPGTPGSGPVAWTCAVTSNANNKYVPAECRIP*