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SCNpilot_expt_1000_bf_scaffold_743_curated_8

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 8597..9730

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DAC589 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 378.0
  • Bit_score: 599
  • Evalue 3.10e-168
Twitching motility protein PilT {ECO:0000313|EMBL:KIF81225.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 378.0
  • Bit_score: 600
  • Evalue 1.50e-168
pilU1; PilU twitching motility protein; K02670 twitching motility protein PilU similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 378.0
  • Bit_score: 596
  • Evalue 4.80e-168

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGGAACGCGAACAAGCCTCCAAGTTCCTGCATGACCTGCTCAAGCTGATGCTGGCGAAGAACGGCTCGGACCTGTTCCTGACCGCCGAGTTCCCGCCCGCCTTCAAGGTCGACGGGAAGGTGCTGCCGGTCTCGAACGCGCCGCTCACGGGTCAGCATACGGTCGAGCTCGCGCGCGCGCTGATGAACGACAAGCAGGCCGCCGAGTTCGAGGCCCACAAGGAGGTGAACTTCGCCATCAGCCCCGGCGGGATCGGCCGCTTCCGCGTCAATGCGTTCATGCAGCAGAACCGGGTCGGCATCGTGCTGCGCACGATCAACACCGAGATCCCGACCTTCGAGCAGCTCCAGCTGCCCTCGGTGCTCAAGGACCTCGCGCTGACCAAGCGCGGCATGATCATCATGGTGGGCGCCACCGGCTCGGGCAAGTCGAACACCCTGGCCGCGGTGGTCGGGCACCGCAACGAGATGAGCTATGGCCACATCGTGACCATCGAGGACCCGGTGGAGTTCGTGCATCCGCACCGCAACTGCATCGTCACCCATCGCGAGGTGGGCGTCGACACGGAGAGCTGGGAGGTGGCCCTGAAGAACACGCTGCGCCAGGCGCCCGACGTGATCATGATCGGCGAGATCCGCGACCGCGAGACGATGGAGCACGCGGTGGCCTTCGCGGAAACGGGTCACCTGTGCCTGGCCACCCTGCACTCGAACAGCGCCAACCAGGCGCTGGACCGGATCATCAACTTCTTCCCCGAGGAGCGGCGCGCCCAGCTGCTGATGGACCTGTCGCTGAACCTGAAGGCGATCGTGTCGCAGCGGCTGATCCCGATCGCCACCGGCAAGGGCCGGGTGCCGGCGGTCGAGATCCTGCTGAACTCCCCGCTGATCGCCGACCTGATCTTCAAGGGCGAAGTCGGGGCGATCAAGGAGGTCATGAAGAAGAGCCGGGAGCTGGGCATGCAGACCTTCGACCAGGCCCTGTTCGACCTGTTCGAGGCCGGGCGCATCACCTACGAGGACGCGCTGCGCAATGCGGATTCGGTCAACGACCTGCGGCTGAACATCAAGCTGAACAGCAAGCGCTCGGAACGCGACCTCAGCCGCGGCATCGAGCACCTGGACATCGTGTGA
PROTEIN sequence
Length: 378
MEREQASKFLHDLLKLMLAKNGSDLFLTAEFPPAFKVDGKVLPVSNAPLTGQHTVELARALMNDKQAAEFEAHKEVNFAISPGGIGRFRVNAFMQQNRVGIVLRTINTEIPTFEQLQLPSVLKDLALTKRGMIIMVGATGSGKSNTLAAVVGHRNEMSYGHIVTIEDPVEFVHPHRNCIVTHREVGVDTESWEVALKNTLRQAPDVIMIGEIRDRETMEHAVAFAETGHLCLATLHSNSANQALDRIINFFPEERRAQLLMDLSLNLKAIVSQRLIPIATGKGRVPAVEILLNSPLIADLIFKGEVGAIKEVMKKSRELGMQTFDQALFDLFEAGRITYEDALRNADSVNDLRLNIKLNSKRSERDLSRGIEHLDIV*