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SCNpilot_expt_1000_bf_scaffold_743_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9759..9980)

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=12493149 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 73.0
  • Bit_score: 122
  • Evalue 1.60e-25
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 73.0
  • Bit_score: 121
  • Evalue 3.90e-25
infA; translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 73.0
  • Bit_score: 119
  • Evalue 4.40e-25

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGTCCAAGGAAGAGCTGATCGAAATGGAAGGCGTCGTCGCCGAGGTGCTCCCCGATACGCGCTATCGCGTCACGCTGAGCAACGGGGTCGAGATCTCCGCCTATGCGGCCGGCAAGATGAAGAAGAACCGCATCCGCGTGCTGCCCGGCGACCGGGTCACGATGGAGCTGTCGCCCTATGACCTCACCAAGGGCCGCATCCGCTACCGGCACAAGGACTGA
PROTEIN sequence
Length: 74
MSKEELIEMEGVVAEVLPDTRYRVTLSNGVEISAYAAGKMKKNRIRVLPGDRVTMELSPYDLTKGRIRYRHKD*