ggKbase home page

SCNpilot_expt_1000_bf_scaffold_116_curated_142

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 152761..154737

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 599.0
  • Bit_score: 416
  • Evalue 5.30e-113
hypothetical protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 604.0
  • Bit_score: 404
  • Evalue 4.60e-110
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037B7F3C similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 695.0
  • Bit_score: 423
  • Evalue 5.20e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1977
TTGAATACCGAATATCCGGGCGAGAGCCGCTACGACCTTGCAGCGTCCGACGTCGACGCCGCCGAGAAACCTCGTGCCGACGCCGACCGCGCCGACTCTGCCCGCTCCGAGGCCGGCCGAGCCGATGCCGCCCAGGCCGACGCAGTCGCGGGGGAGGCCGCCGCGCCGTTGCCGGAGACCGAAGGTGCGGCCGGCGCCCGCGAGCCGCGCCCGCTGCGGACCATGTTCAACCGCCGCCGCGGCGGCAACCGGTCGGGCTCCAGGGGTCCGCGCGGCGGCCGGCGCGCCCCCGGGGAAGAGGCAGGTACGGCGGACGTCGATGAATCGACGGCGGTCGGAGCGGCGGCAAGCGGCGCCTCCGAGGCGCCGGGCCTCGGCAGCGAGGGTGCGACCCCGGCCGACGCGCTGCGAGCCGATGCGTCGGCCGGCGAGGCGTCGGCGGGTGGGGCGTCGTCGCCCGAGGTCGAGCCGCTGCCTGCCTATGCCAGCGGTCCCGCGATCGGGCTGGATGCGGCCGATCCGCGTCGCCGCGGCCAGCGCCGCCAGTCCGTCGAGGACCAGCCCAAGCTGCACAAGGTGCTCGCCGACGGGGGGCTCGGCTCGCGCCGCGAGATGGAGGAGCTCATCCTCGCCGGGCGCGTGTCGGTGAACGGCCAGCCGGCGCACATCGGCCAGCGCATCGGCCCGGGGGACCAGGTCCGCGTCAACGGGCGCACCATCAACCGCCGCGCCGCGCCGGCTGCGCCGCGCGTGCTGCTCTACCACAAGCCGGCCGGCGAGATCTGTACCCGCGACGATCCCGGCCAGCGCATCACCGTGTTCGAGAAGCTGCCGCGCCTGAAGGGCGCGCGCTGGGTGGCGGTCGGCCGGCTCGACTACAACACCGAGGGCCTGCTGGTCTTCACCACTTCGGGTGATCTCGCCAACAAGCTGATGCACCCGCGCTACGGCTGGGAGCGCGAATACGCGGTGCGCATCCTCGGGCGCATCGACGAGGCCGCGCGCGAGTCGCTGCTCGCCGGCGTGCAGCTCGAGGACGGCCCGGCGCGCTTCACCGCGATCGAAGACCTCGGCGGCGACGGCGCCAACGCCTGGTATCGCGTGGTGATCGCCGAAGGGCGCAATCGCGAGGTGCGGCGCATGTTCGAGGTGGTCGGCCTCACCGTGAGCCGGCTGGTGCGCCTGCGCTTCGGGCCGCTGGCGCTGCCGCGCGGCCTGGCCCGCGGCCGCTGGGCCGAGCTGGGCGGCGCCGAGCTGCAGGCACTTTCCGAGGCCATCCGGCGCGCCAGCGCGCCGGCCGCGGGTGCCGGCAGGCCGGCGCGCGGCGGCGCCGCGGCCGAGCAGGTCCGCGGCATGGACGAGCGGGACGAGGAGCGCGACGACGATCGCCACGACCAGCACTTCGGCGAGGAGGGCGGCGACGGCGAGGAGGATCCGGCCGACTCGATCGGCAACCGCGCGCTGCCCGAACCCGGGCCCGAGCCGCACCATCTGAACGACGACGAGTGGCAGCCGCGCTCGGCCAACGCCCACCTGGAAGGCATCACGCGCGCGGTGCGCAAGGGCGACGGCTCGCAGCCGGCCGGCGGCAAGCGCTCGGCCTTCGCCCGGTCGAAGGGCGGGCGCGGCGCGCGTGCCGCCACGTTCACCGGGCCGATGGATACCGGCCGCTCGGGCGGGGTGACCGGCGCCTATGGCGGCGGCTACGGTCCGTCGGGCCAGCCCGGTTCGCGCAATCCCCAGGGGCCGCGCGACGGCAAGGGGCGTCGCGGCGGGCCGGGCGGACGCGGCCCGGCGGCACGCGGGGCGGGCCGCGACGGGCAGGGTCCGCGCGGCGGCCCGGCCGGGGCGCAGGGGCAGGGGCAGGGACAAGGGCAGGGACAAGGGCAGGGACGCAGCGGCCAGCCCGGCAAGGGCGGGCGGCGCGGCGGGCGCTCGCGCGGCCGCACGGGCGGCGGCGGCCATGGCAATACCTGA
PROTEIN sequence
Length: 659
LNTEYPGESRYDLAASDVDAAEKPRADADRADSARSEAGRADAAQADAVAGEAAAPLPETEGAAGAREPRPLRTMFNRRRGGNRSGSRGPRGGRRAPGEEAGTADVDESTAVGAAASGASEAPGLGSEGATPADALRADASAGEASAGGASSPEVEPLPAYASGPAIGLDAADPRRRGQRRQSVEDQPKLHKVLADGGLGSRREMEELILAGRVSVNGQPAHIGQRIGPGDQVRVNGRTINRRAAPAAPRVLLYHKPAGEICTRDDPGQRITVFEKLPRLKGARWVAVGRLDYNTEGLLVFTTSGDLANKLMHPRYGWEREYAVRILGRIDEAARESLLAGVQLEDGPARFTAIEDLGGDGANAWYRVVIAEGRNREVRRMFEVVGLTVSRLVRLRFGPLALPRGLARGRWAELGGAELQALSEAIRRASAPAAGAGRPARGGAAAEQVRGMDERDEERDDDRHDQHFGEEGGDGEEDPADSIGNRALPEPGPEPHHLNDDEWQPRSANAHLEGITRAVRKGDGSQPAGGKRSAFARSKGGRGARAATFTGPMDTGRSGGVTGAYGGGYGPSGQPGSRNPQGPRDGKGRRGGPGGRGPAARGAGRDGQGPRGGPAGAQGQGQGQGQGQGQGRSGQPGKGGRRGGRSRGRTGGGGHGNT*