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SCNpilot_expt_1000_bf_scaffold_116_curated_147

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 160449..161444

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.; similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 295.0
  • Bit_score: 349
  • Evalue 4.00e-93
tRNA pseudouridine synthase B n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JDX3_BURVG similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 295.0
  • Bit_score: 346
  • Evalue 2.40e-92
trNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 295.0
  • Bit_score: 346
  • Evalue 7.50e-93

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Taxonomy

Burkholderia cenocepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGCCGGTCGACGGCGTCCTGCTGCTGGACAAGCCGCGCGGCCTGAGCTCGACCGGCGCGCTGGCGCGCGCGCGCCGGCTGCTCGGGGCGCGCAAGGCCGGCCATGGCGGCACGCTCGATCCCATGGCCACCGGCCTGCTGCCCCTGCTGTTCGGCGAGGCGACCAAGTTCGCCGACGACTCGCTGGCGGCCGACAAGACCTACCTGGCCGAGATCACCCTGGGCGTGGCCACCGATACCGGCGACGCCGAGGGCGAGCCGATTGCCCGGCGCGAGGTCCGCTGCGATGCCGCGGCGTTCGCCGCGGCGGCCGCTGCCTTCGTCGGCCGCATCGAGCAGGTGCCGCCCATGCATTCGGCGCTCAAGCGCGACGGCCGGCCGCTGTACGACTATGCGCGGGCCGGCCTGGCCGTCGAGCGCGCCCCGCGCACCGTGACCGTCCACGCCATCGAGATGCTGGCCTGGGATGCTCCGCGCGCCAGCGTGCGCGTGAGCTGCAGCAAGGGCACCTACATCCGCACCCTGGCCACCGACATCGGCGAGCGCCTGGGCTGCGGCGCGCACCTGAGCGCGCTGCGCCGCGAGCGCGTCGGCGCCCTGTCGGTGGCCGACGCGATCACCCTCGAGGCGCTCGAGGCGCTCGCGCCCCACGAGCGGCAGGCCCGGCTCGCGCCGGCCGACGCGCTGCTCGCCGGCCTGCCCCGCGTGACGCTCGACGACGCCGGCGCCGCGCGCTTCCTGCACGGCCAGAAGCTGCGCGCCCCGCAGCCGCTGCCCGCGCCGGAAGGCGCGCGCCTGCGCGTGTATGCCGCCGAGCGCCTGCTCGGCGTGGCCGAGCTGCGCGGCGGCGCCCTGGTGCCGCGGCGGCTGATCGCCACCGGCGCCGGCGCGCCGGCCGGCGTCGAGGACCGGCCCAGCCCTGGGGCGCCAGCCCGCGCGGACCCCGCCGGCACTGGCGCGCCCGGCGACCCATCTCCAGACAGAAGCACCCCATGA
PROTEIN sequence
Length: 332
MPVDGVLLLDKPRGLSSTGALARARRLLGARKAGHGGTLDPMATGLLPLLFGEATKFADDSLAADKTYLAEITLGVATDTGDAEGEPIARREVRCDAAAFAAAAAAFVGRIEQVPPMHSALKRDGRPLYDYARAGLAVERAPRTVTVHAIEMLAWDAPRASVRVSCSKGTYIRTLATDIGERLGCGAHLSALRRERVGALSVADAITLEALEALAPHERQARLAPADALLAGLPRVTLDDAGAARFLHGQKLRAPQPLPAPEGARLRVYAAERLLGVAELRGGALVPRRLIATGAGAPAGVEDRPSPGAPARADPAGTGAPGDPSPDRSTP*