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SCNpilot_expt_1000_bf_scaffold_1270_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 730..1383

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Herbaspirillum lusitanum RepID=UPI000368E7D7 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 217.0
  • Bit_score: 341
  • Evalue 6.60e-91
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 217.0
  • Bit_score: 338
  • Evalue 1.80e-90
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=882378 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 217.0
  • Bit_score: 338
  • Evalue 7.90e-90

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Taxonomy

Burkholderia rhizoxinica → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGCCTTGGCCTTGTGGGACGCAAGGTCGGCATGATGCGCATCTTCACTGACGATGGCGACTCCATCCCGGTGACGGTGCTCGACGTGTCGGACAACCGCGTCACCCAGATCAAGACCGTCGAGAACGACGGTTACAGCGCGGTCCAGGTGACCTACGGCAAGCGCCGTGCCACCCGCGTCACCAAGCCGCAGGCCGGGCACTTCGCCAAGGCCGGCGTCGAGGCCGGCAGCATGGTGCGCGAATTCCGCGTCGCCCCCGAGGCCCTGGCCGAGCTCGCGCCGGGCGCCGTCGTGAACGTGGCGATCTTCTCCGCCGGCCAGAAGGTGGACGTGCACGGCACCTCGATCGGCAAGGGCTTCGCCGGCACGATCAAGCGCCACAATTTCGGCTCCGGCCGCGCCTCGCACGGCAACTCGCGTTCGCACAACGTGCCGGGCTCGATCGGCATGGCGCAGGATCCGGGCCGCGTGTTCCCGGGCAAGCGCATGTCCGGCCACCTCGGCGCGGTGGCCTGCACGGTGCAGAACCTCGAGGTCGCCCGCGTCGACGCCGAGCGCGGCCTGCTGCTGGTGCGCGGCGCCGTGCCGGGCGCGAAGAACGGCAACGTGGTCGTGACGCCGACGGTGCGCGCGGCCGCGCCCAAGGCCTGA
PROTEIN sequence
Length: 218
MSLGLVGRKVGMMRIFTDDGDSIPVTVLDVSDNRVTQIKTVENDGYSAVQVTYGKRRATRVTKPQAGHFAKAGVEAGSMVREFRVAPEALAELAPGAVVNVAIFSAGQKVDVHGTSIGKGFAGTIKRHNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHLGAVACTVQNLEVARVDAERGLLLVRGAVPGAKNGNVVVTPTVRAAAPKA*