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SCNpilot_expt_1000_bf_scaffold_1270_curated_5

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 2024..2320

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=3 Tax=Alcaligenes RepID=J0JF53_ALCFA similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 97.0
  • Bit_score: 148
  • Evalue 2.90e-33
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 97.0
  • Bit_score: 148
  • Evalue 4.00e-33
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 97.0
  • Bit_score: 146
  • Evalue 5.80e-33

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Taxonomy

Alcaligenes sp. EGD-AK7 → Alcaligenes → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGAACCAGGAGCGTCTGATGACGGTGCTCGTCGCGCCGATCGTCTCGGAGAAGGCGACCATGGCCGCCGAGAAGAACGGCCAGGTGCTGTTCCGCGTGCTGCAGGATGCCACCAAGGACGAGATCCGGGCGGCGGTCGAGCTGCTGTTCAAGGTCGAGGTCGAGTCGGTGCAGGTGCTCAACCAGAAGGGCAAGCAGAAGCGCTTCGGCCGCTTCAACGGTCGTCGCCGCAACGTGCGCAAGGCCTACGTGAGCCTCAAGCCGGGCCAGGAAATCAACTTCGCGGAGGCCATCTAG
PROTEIN sequence
Length: 99
MNQERLMTVLVAPIVSEKATMAAEKNGQVLFRVLQDATKDEIRAAVELLFKVEVESVQVLNQKGKQKRFGRFNGRRRNVRKAYVSLKPGQEINFAEAI*