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SCNpilot_cont_500_bf_scaffold_43_curated

Search features with annotation key words

Displaying items 271-300 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_43_curated_268
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(249321..249584)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000375D773
Cytoplasmic protein {ECO:0000313|EMBL:KGM10764.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_269
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(249657..250823)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000367A8AE
4Fe-4S ferredoxin
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_500_bf_scaffold_43_curated_270
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(250825..251073)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003763207
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_43_curated_271
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(251070..252839)
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000375ED8C
FAD binding protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_500_bf_scaffold_43_curated_272
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(252836..255577)
DNA (2742bp) protein (914aa)
glutamate synthase (EC:1.4.1.13)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000373A292
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_500_bf_scaffold_43_curated_273
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(255624..256094)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003667A37
Uncharacterized protein {ECO:0000313|EMBL:KJS14256.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_274
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(256126..256542)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035DBD9C
coenzyme F420-reducing hydrogenase, delta subunit
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_43_curated_275
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(256547..256807)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037B6C57
putative redox protein, regulator of disulfide bond formation
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_43_curated_276
unknown

Not on your lists

257050..257220
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_277
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(257242..260268)
DNA (3027bp) protein (1009aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037F7BB4
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_cont_500_bf_scaffold_43_curated_278
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

260450..261184
DNA (735bp) protein (245aa)
Putative HTH-type transcriptional regulator n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S2J1_ACTS5
Uncharacterized protein {ECO:0000313|EMBL:KEP23366.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
putative HTH-type transcriptional regulator
SCNpilot_cont_500_bf_scaffold_43_curated_279
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(261208..261516)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036A5FCB
fixX; Ferredoxin-like protein fixX; K03855 ferredoxin like protein
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_43_curated_280
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(261492..262814)
DNA (1323bp) protein (441aa)
electron transfer flavoprotein-quinone oxidoreductase (FixC protein); K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
FAD dependent oxidoreductase n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1Q4J1_9ACTO
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_43_curated_281
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(262807..263742)
DNA (936bp) protein (312aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QHU1_9ACTO
fixB; electron transfer flavoprotein FixB; K03522 electron transfer flavoprotein alpha subunit
Tax=BJP_08E140C01_Actinomycetales_67_18
SCNpilot_cont_500_bf_scaffold_43_curated_282
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(263770..264546)
DNA (777bp) protein (259aa)
Electron transfer flavoprotein domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNZ9_9ACTO
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EEZ78326.1}; TaxID=649743 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 848 str. F0332.;"
fixA; electron transfer flavoprotein FixA; K03521 electron transfer flavoprotein beta subunit
SCNpilot_cont_500_bf_scaffold_43_curated_283
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(264576..265721)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WLL6_9ACTO
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEZ79317.1}; TaxID=649743 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 848 str. F0332.;"
acyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_43_curated_284
Listeria welshimeri, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

265907..267496
DNA (1590bp) protein (530aa)
pct; propionate CoA-transferase; K01026 propionate CoA-transferase [EC:2.8.3.1]
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=386043 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 /; SLCC5334).;"
Acetate CoA-transferase YdiF n=1 Tax=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) RepID=A0AKS6_LISW6
SCNpilot_cont_500_bf_scaffold_43_curated_285
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

267508..268755
DNA (1248bp) protein (416aa)
Lin2274 protein n=1 Tax=Listeria innocua serovar 6a (strain CLIP 11262) RepID=Q929K1_LISIN
hypothetical protein rbh
Lin2274 protein {ECO:0000313|EMBL:CAC97502.1}; TaxID=272626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria innocua serovar 6a (strain CLIP 11262).;"
SCNpilot_cont_500_bf_scaffold_43_curated_286
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

268821..270371
DNA (1551bp) protein (517aa)
Acyl-CoA ligase n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DU91_COREQ
AMP-binding enzyme {ECO:0000313|EMBL:EGD23167.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
acyl-CoA ligase
SCNpilot_cont_500_bf_scaffold_43_curated_287
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(270368..271705)
DNA (1338bp) protein (446aa)
beta-galactosidase (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21]
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Beta-galactosidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6P8_CONWI
SCNpilot_cont_500_bf_scaffold_43_curated_288
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(271736..272950)
DNA (1215bp) protein (405aa)
Inner-membrane translocator n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6P9_CONWI
inner-membrane translocator; K10544 D-xylose transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ADB52697.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_43_curated_289
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(272950..273744)
DNA (795bp) protein (265aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6Q0_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB52698.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_43_curated_290
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(273741..274868)
DNA (1128bp) protein (376aa)
Xylose binding protein transport system n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6Q1_CONWI
sugar ABC transporter substrate-binding protein; K10543 D-xylose transport system substrate-binding protein
Xylose binding protein transport system {ECO:0000313|EMBL:ADB52699.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_43_curated_291
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(274929..276176)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037581A6
Uncharacterized protein {ECO:0000313|EMBL:KGM17252.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ROK family protein
SCNpilot_cont_500_bf_scaffold_43_curated_292
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(276281..279271)
DNA (2991bp) protein (997aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQC4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD35225.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_293
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

279396..280322
DNA (927bp) protein (309aa)
DNA-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XBN8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ETK36801.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_43_curated_294
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(280298..281242)
DNA (945bp) protein (315aa)
aldose-1-epimerase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B43933
epimerase
Putative epimerase {ECO:0000313|EMBL:CAQ00699.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
SCNpilot_cont_500_bf_scaffold_43_curated_295
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(281239..283377)
DNA (2139bp) protein (713aa)
alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22]
alpha-galactosidase n=1 Tax=Glaciibacter superstes RepID=UPI0003B58680
Alpha-galactosidase {ECO:0000313|EMBL:ETK36802.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
SCNpilot_cont_500_bf_scaffold_43_curated_296
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(283382..284242)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003066544
Sugar ABC transporter permease {ECO:0000313|EMBL:ETK36803.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_43_curated_297
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(284235..285182)
DNA (948bp) protein (316aa)
ABC transporter, permease protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHA1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK36804.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein
Displaying items 271-300 of 328 in total

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