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SCNpilot_cont_500_bf_scaffold_43_curated

Search features with annotation key words

Displaying items 241-270 of 328 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_43_curated_238
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(212682..214340)
DNA (1659bp) protein (553aa)
ComEC/Rec2-related protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A1S6_CELGA
ComEC/Rec2-related protein; K02238 competence protein ComEC
ComEC/Rec2-related protein {ECO:0000313|EMBL:AEI11733.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_43_curated_239
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(214337..215143)
DNA (807bp) protein (269aa)
Soluble ligand binding domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A1S5_CELGA
Soluble ligand binding domain protein; K02237 competence protein ComEA
Soluble ligand binding domain protein {ECO:0000313|EMBL:AEI11732.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_43_curated_240
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(215783..216988)
DNA (1206bp) protein (402aa)
DegV family protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3F4_CELFA
degV family protein
DegV family protein {ECO:0000313|EMBL:AEE46499.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_241
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(216994..219912)
DNA (2919bp) protein (973aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
leucyl-tRNA synthetase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000368412F
SCNpilot_cont_500_bf_scaffold_43_curated_242
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

220072..221856
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3F6_CELFA
hypothetical protein; K06915
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46501.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_243
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(221864..222541)
DNA (678bp) protein (226aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGM9_CELFN
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ADG75127.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_244
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(222559..224361)
DNA (1803bp) protein (601aa)
Putative lipoprotein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGN3_CELFN
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADG75131.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_245
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

224443..225294
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B421_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91255.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_500_bf_scaffold_43_curated_246
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(225328..225960)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGN5_CELFN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46514.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_43_curated_247
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

226022..226528
DNA (507bp) protein (169aa)
NUDIX hydrolase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGN9_CELFN
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADG75137.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_248
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(226560..229226)
DNA (2667bp) protein (889aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
Phosphoenolpyruvate carboxylase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGP1_CELFN
SCNpilot_cont_500_bf_scaffold_43_curated_249
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

229325..229813
DNA (489bp) protein (163aa)
Transcriptional regulator, MarR family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGP3_CELFN
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADG75141.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_43_curated_250
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(229843..231012)
DNA (1170bp) protein (390aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FQ35_ISOV2
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:AEG44841.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
SCNpilot_cont_500_bf_scaffold_43_curated_251
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

231166..231414
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036A8640
Uncharacterized protein {ECO:0000313|EMBL:KDE99057.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_252
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

231470..232894
DNA (1425bp) protein (475aa)
Major facilitator superfamily MFS_1 n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BV19_XYLCX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACZ31258.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_500_bf_scaffold_43_curated_253
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(232902..233513)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E2Z4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDK00888.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_254
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233646..234716)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D985_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AJE02673.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_255
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(234713..235891)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036D0C12
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACL38432.1}; Flags: Precursor;; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_cont_500_bf_scaffold_43_curated_256
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

236095..238236
DNA (2142bp) protein (714aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Putative superfamily I DNA and RNA helicase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JPP2_STRHJ
putative superfamily I DNA and RNA helicase
SCNpilot_cont_500_bf_scaffold_43_curated_257
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(238243..238719)
DNA (477bp) protein (159aa)
membrane protein n=1 Tax=Ruania albidiflava RepID=UPI0003B4B7F1
Uncharacterized protein {ECO:0000313|EMBL:KJS61727.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
integral membrane protein
SCNpilot_cont_500_bf_scaffold_43_curated_258
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(238828..239637)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BDQ8_SANKS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ21120.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_500_bf_scaffold_43_curated_259
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

239785..240912
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037B1899
Uncharacterized protein {ECO:0000313|EMBL:EWT03363.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_260
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

240992..242365
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00037F0033
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACZ31540.1}; Flags: Precursor;; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_500_bf_scaffold_43_curated_261
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

242362..243051
DNA (690bp) protein (230aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BWJ4_XYLCX
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ31539.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_500_bf_scaffold_43_curated_262
unknown

Not on your lists

comp(243195..244130)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_43_curated_263
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

244378..244914
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H8U2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERK70110.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_43_curated_264
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

245013..246341
DNA (1329bp) protein (443aa)
iron transporter n=1 Tax=Humibacter albus RepID=UPI0003B781E2
Divalent metal cation transporter MntH {ECO:0000313|EMBL:KJL19521.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
natural resistance-associated macrophage protein
SCNpilot_cont_500_bf_scaffold_43_curated_265
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

246419..246961
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJ68_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EME99786.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
SCNpilot_cont_500_bf_scaffold_43_curated_266
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(247018..248601)
DNA (1584bp) protein (528aa)
Putative transport protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYE7_THERP
putative transport protein
Putative transport protein {ECO:0000313|EMBL:ACM04777.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCNpilot_cont_500_bf_scaffold_43_curated_267
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

248717..249313
DNA (597bp) protein (199aa)
Regulatory protein TetR n=2 Tax=Micromonospora RepID=D9T025_MICAI
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ADL47261.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Displaying items 241-270 of 328 in total

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