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SCNpilot_expt_500_p_scaffold_218_curated_1

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(317..4501)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2761
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 999.99
  • Bit_score: 2334
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RPOC_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 999.99
  • Bit_score: 2334
  • Evalue 0.0
  • rbh

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 4185
ATGACAGCAAATAATCAAAATGATACGCGATTTGATAAATTAACGATCCAAATCGCATCAGATGAAGTCATACGTAATAAATGGTCACGTGGAGAAATTAAAAAACCTGAAACGATCAACTATCGTACTTTCAAACCTGAAAAAGGTGGCCTTTTTTGCGAAAAGATTTTTGGTCCTACCCGCGATTGGGAATGTGCTTGCGGAAAATACAAAAAGATTAAGCACAAAGGAATAGTTTGTGATCGCTGTGGTGTAGAAGTTACTTTATCTAAAGTTCGACGTGAGAGAATGGCTCACATCGAACTTGCCGTACCTGTTGTGCATATTTGGTTTTTTAAAACTATGCCATCACGTATCGGTAACGTTTTAGGTATGTCTTCGACTGACCTTGAAAGAGTTATTTATTACGAAGAATATGTAGTAGTAGATCCAGGTCATACTAACTTACAAAAAAAACAATTGTTAAATGATACGGAATATAGAGAAGCACAAGAACAATTTGGAAGAGATGCTTTTGTTGCCAAGATGGGGGCTGAAGCGATTCACGATCTATTAGCAACAGAAGATTTAAGTACAGTTCTTGCTGATTTAAAAGAAAAACTTCGTAAAACCAAATCGCAACAAGCGAGAATGAAGTTAGCTAAACGTTTAAAAATCATTGAAAGTTTTGTATCTTCTACAAATAAACCTGAATGGATGGTAATGTCTGCAGTTCCGGTTATTCCACCAGACTTAAGACCTTTAGTTCCATTAGATGGTGGTAGATTTGCAACTTCAGACTTAAACGATCTATATCGTAGAGTAATTAACAGAAACAATCGCTTAAAAGCAATTTTGAAACTTAAAACTCCTGAAGTTATTATCCGTAACGAAAAAAGGATGTTGCAAGAAGCTGTTGATGCCTTATTTGATAATGGTCGTCATGGTCATCCAGTAATGGGTGCTGGCAACCGTCCTTTAAAATCTTTATCAGAAATGTTAAAAGGTAAACAAGGGCGTTTCCGTCAAAATTTACTTGGTAAAAGGGTTGATTACTCAGGACGTTCTGTTATTATCGTAGGTCCTGAACTTAAGTTTAATCAATGCGGTTTGCCAAAATTGATGGCGCTAGAACTTTTTGAGCCTTTTATTGTAAAGCGCTTAAAAGATTTAGGTTACGTTTATACCATCCGCTCTGCCAAAAAAATGATACAAAGACATGCGCCAGAAGTTTGGGACGTATTAGAAGATATCATCAAAGGACATCCTGTATTATTAAACCGTGCACCTACATTGCATAGATTAGGTATTCAAGCATTTGAGCCTGTCTTAATTGAAGGTAAAGCGATTAGAATACATCCTCTTGTTTGTGAAGCATTTAACGCCGACTTTGACGGTGACCAAATGGCGGTTTATGTTCCTTTATCTATAGAAGCGCAATTAGAAGCTAAGCTATTAATGATGGCTCCAGATAACATTTTCTTACCTTCTTCTGGAAATCCTGTGGCTGTTCCTTCTAAAGATATGACCTTAGGATTGTATTATTTAATGTGCGAGCCAGTTTATCTTCCAGAAAAATATGGCAGAAAAACGAGAGTTTTCCGCGATTCAGATGAAGTGTTAATGGCTTTAAATGCAGGTGGAAGCTACAACTGGTATGATGATGGTATCGATGAAGATAGAACCTTCTTTGGTAGAGGGCTTCGTATTCATGAAAAAATCAAATTGAGAACCGATAATGGGATTATCGAAACCACTCCTGGTCGTGTAATCTTTAATACTATTGTACCAAAAGAATTAGGCTTTCAAAACTACACTTTACCCAAAAAGAAAATGGGTGAATTGATTATGCAATGTTATAAAAAAGTAGGACTTGAAGCCACTGTAAAATTTTTAGACAATCTAAAAACACTAGGTTTCACAGAAGCTACTAAAGCTGCTATTTCTATGGGCGTTTGCGATGTCAAAATCCCTGAAATTAAACGCAGTATTTTAGACGATGCGCATAAAAAAGTCGCTTTGGTGAAAAAACAATACGAAGATGGTATCATTACTGATGGGGAGAGAAAATCTAAAACCATTAGTATTTGGACAGAAGTATCTGATGAAGTATCAGATGCCCTCTATCATTTAATAAGTGAAGTTCATAATGCTAAAATGAACCCTCTTTACGTTATGATTGATTCTGGAGCTAGAGGTAATAAGTCTCAGTTAAGACAGCTTGGCGCGTTGCGCGGCTTGATGGCAAAACCATCTGGAGAAATTATTGAATCTCCGATTACTTCAAACTTCCGTGAAGGCTTAAGTGTATTAGAATTTTACATTTCTTCTCACGGTGCGCGTAAAGGTCTTGCAGATACGGCGTTAAAAACCGCTGACTCTGGATATTTAACGAGACGTTTAGTTGACGTAGCTCAAGATGTGATTATAACAGAAGAAGACTGTGGTACATTAAACGGTATTGAAGTTTCATCTATAAAACAAGGGCAAGAAGAGCTTTTATCGCTAAAAGATAGAATTTTTGGCCGTACTGTGTGTGATGATATCTACTTACCTGGTGATAGCACAAAACTATTAGCAAAAGCATCTGATACTTTAACATTGCAACAAGCTGAAGCTATAGATGATTCAGGTATTGAAAGCGTTAAAATCCGCTCCGTCTTAACTTGTGAAACAAGAAGAGGGGTTTGTGCAAAATGTTATGGTGTTAACTTAGCTAATGGTAGAAGTGTTAGCATGGGTGAAGCTGTTGGTATTATTGCAGCTCAATCAATTGGTGAACCTGGTACACAGTTGACGATGAGAACGTTCCACTTAGGTGGTATTGCGTCTGCAAGCGTTAGCCCAGAACTTGTTGCTGAGCATAAAGGTATCTTGATCTATAAAGATTTACGCACAGTTAAAAATGAGCACGGTCAGTGGGTTGTGTTAAACAAAAATGGTTCTTTAAACATTGTAAGAGATGAAGGAAGAACAATTGAAGAGTATAAAAAACTGCTCAGCACAAAATCTATTGAACCATTACAAAGTTTAACTGTTGAACTTGGAACTCGAATTTTGTTAGAAGATGGTACTCATCTAGAAGAAAACACAAAATTTGCGGAATGGGAACAACATAATATTCCAATTATTTGTGATCGCCCAGGTTATGTTAAGTATGAAGACTTAGTAGAAGGTATCTCTACGGAGCGAAATACTAATAAGCAAACCGGACAAGAAGAGTTAGTAGTTAAGCAACATCGCAGTGAGCTACATCCTCAAATCATTATTTATAACGATAATGAATTTAAGGAGCTTATCGGAACTTATCCGATTCCATCAGGCGCTATCATTTCTGTAAAAGAAGGTGATAGAGCTCATGCGGGTGCATTATTAGCTCGTCTTCCACGTGGCGCTATGAAGACAAAGGATATTACCGGTGGTCTTCCAAGGGTTGCTGAGTTATTTGAAGCTAGAACTCCTAAAGATTCAGCTATTATTGCGATTATTGATGGTGAAGTGCGCGTTGAAGGTACTCAAAAGCAAAAACTAGTTGTGAGTGTTAAAGATCATGTAACAGGCATGAAAGAAGAACACCAAATCCCAAATAATAAACACATGATTGTCCAAAGCGGCGATTTTGTAGTGAAAGGACAACAGTTAACGGATGGTATTGTTAAACCACACGAAATCTTGGAAATTTGCGGTGTCAGAGAAGTGCAAAAATACATCGTCAATAACGTTCAAGAAGTTTATAGATTGCAAGGTGTAACTATTAACGACAAGCACGTAGAAATTATTGTGCGTCAAATGTTGAAAAAAGTTCGCGTAGTCGATCCAGGTGATACAAGCCTATTGTTTGGAGAAGAAGTAGATAAAAAAGAATTCGAAAATGAAAATGCTAAAGTCATGAAAGAAGGTGGAAAAGCCGCGCAAGCAACACCTGTTCTTTTAGGGATAACTAAGGCATCTTTAGGTACTGAATCCTTTATTTCTGCTGCATCCTTCCAAGACACGACTCGTGTTTTAACAGAAGCTGCGTGTGCTGGTAAAACTGATTACCTTACTGGATTTAAAGAAAACGTTATCATGGGACATATTATCCCAGGTGGTACCGGTTATCCACAACATGAAGTTGTTAATAAGTTTATTGGTAGAGAAAGAGATGAAAAATTTGTTATCGATTTTGATACCATTTTCCCTGAAAACTTAACTTCTATAAAATAG
PROTEIN sequence
Length: 1395
MTANNQNDTRFDKLTIQIASDEVIRNKWSRGEIKKPETINYRTFKPEKGGLFCEKIFGPTRDWECACGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPVVHIWFFKTMPSRIGNVLGMSSTDLERVIYYEEYVVVDPGHTNLQKKQLLNDTEYREAQEQFGRDAFVAKMGAEAIHDLLATEDLSTVLADLKEKLRKTKSQQARMKLAKRLKIIESFVSSTNKPEWMVMSAVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILKLKTPEVIIRNEKRMLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPELKFNQCGLPKLMALELFEPFIVKRLKDLGYVYTIRSAKKMIQRHAPEVWDVLEDIIKGHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRIHPLVCEAFNADFDGDQMAVYVPLSIEAQLEAKLLMMAPDNIFLPSSGNPVAVPSKDMTLGLYYLMCEPVYLPEKYGRKTRVFRDSDEVLMALNAGGSYNWYDDGIDEDRTFFGRGLRIHEKIKLRTDNGIIETTPGRVIFNTIVPKELGFQNYTLPKKKMGELIMQCYKKVGLEATVKFLDNLKTLGFTEATKAAISMGVCDVKIPEIKRSILDDAHKKVALVKKQYEDGIITDGERKSKTISIWTEVSDEVSDALYHLISEVHNAKMNPLYVMIDSGARGNKSQLRQLGALRGLMAKPSGEIIESPITSNFREGLSVLEFYISSHGARKGLADTALKTADSGYLTRRLVDVAQDVIITEEDCGTLNGIEVSSIKQGQEELLSLKDRIFGRTVCDDIYLPGDSTKLLAKASDTLTLQQAEAIDDSGIESVKIRSVLTCETRRGVCAKCYGVNLANGRSVSMGEAVGIIAAQSIGEPGTQLTMRTFHLGGIASASVSPELVAEHKGILIYKDLRTVKNEHGQWVVLNKNGSLNIVRDEGRTIEEYKKLLSTKSIEPLQSLTVELGTRILLEDGTHLEENTKFAEWEQHNIPIICDRPGYVKYEDLVEGISTERNTNKQTGQEELVVKQHRSELHPQIIIYNDNEFKELIGTYPIPSGAIISVKEGDRAHAGALLARLPRGAMKTKDITGGLPRVAELFEARTPKDSAIIAIIDGEVRVEGTQKQKLVVSVKDHVTGMKEEHQIPNNKHMIVQSGDFVVKGQQLTDGIVKPHEILEICGVREVQKYIVNNVQEVYRLQGVTINDKHVEIIVRQMLKKVRVVDPGDTSLLFGEEVDKKEFENENAKVMKEGGKAAQATPVLLGITKASLGTESFISAASFQDTTRVLTEAACAGKTDYLTGFKENVIMGHIIPGGTGYPQHEVVNKFIGRERDEKFVIDFDTIFPENLTSIK*