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SCNpilot_expt_500_p_scaffold_218_curated_2

Organism: scnpilot_dereplicated_Chlamydia_1

near complete RP 50 / 55 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4537..8304)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2460
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 999.99
  • Bit_score: 2161
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Neochlamydia hartmannellae RepID=S4TKN9_9CHLA similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 999.99
  • Bit_score: 2169
  • Evalue 0.0

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Taxonomy

Chlamydia sp. 'Rubis' → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 3768
ATGTTGAAAAGGCCGCCAAAACGTGTAAGTTTTATCAACAAAAATGAAATTATTGATCTTCCAAACCTCATTGAAATTCAAGTAAAGTCTTATGATCAGTTTTTGCAAGTAGATAAATTTCCAGATGAAAGAGAAAATATCGGGCTGCAAGAAGTATTTAATGAGATGTTTCCCATCAAGTCATATGATGAAAAAACAATCTTGGAATTTATTTCTTATAGTTTAGGAGTTCCAAAATATTCTGCCGAAGAATGTATTCGTCGTGGAATTACCTATAACGTAACCTTAAAAGTAAAATTTCGTTTAACAGACGAAACTGGAATTAAAGAAGAAGAAGTCTATATGGGAACTATACCCATAATGACAGACAAGGGTACTTTTGTTATCAATGGAGCTGAAAGGGTAGTTGTTTCTCAATTACATAGATCTCCAGGTATTAGTTTCGAACACGAAAGAAGCCTTAGAGGATCTGCTATCTATTCTTTCCGTATTATTCCTTATAGAGGTAGCTGGTTAGAAGGAGCTTTCGATACAAATGACCTAATCTATATATACATCGATCGAAAAAAACGTCGCAGAAAAATTCTAGCTACAACATTTATTAGAGCCTTAGGATTTTCTTCTAACTCCGATATTATTGAAGAATTTTTTAGCACCAAGAAAGAAAAGATTAAGTCTGAAAAAGAATTTGCTAAATTAGTTGGAAAAATCTTAGCGCAAGACGTAATAGATGAAGAAACTGGTACAATTTTTGGTAAAGCTGCTGAAAAATTGACAACAGCTATGCTAAAAAGAATGTTAGATGCAGGTGTTGAAGTAATTCGTATTGCTGAAGATGCTGATGAATCCCATCCGATTATTAAAATGTTAGCAAAAGATTCGAGTGACTCATACGAATCAGCTCTAAAAGATTTTTATCGAAAAATTCGTCCAGGTGAACCTGCTACTTTGTCAAATGCACGCTCAGCTATGATGCGTTTATTTTTTGATCCTCGCCGTTACAATTTAGGACGTGTTGGTAGATACAAGTTAAATTCAAAGTTAGGTTTAGAATTAACTGACGAACAATTACAAGTAGTGACCATCACAAAAGAAGACGTAATCGGAGCTTTGAAATATTTAATTAAATTAAAACAAGGTAAAGAAGACGTCAGCACAGATGATATCGATCACTTAGGAAATCGACGTGTTAGATCTGTTGGAGAATTGATTCAAAACCAGTGTCGCATTGGTTTAGCTCGCATGGAAAAAATCATTCGCGAACGGATGAATTTATTTGATTTTTCTTCAGATACTTTAACACCTGGAAAAATCATTTCTGCTAAAGGATTATCTGGCGTATTAAAAGACTTCTTTGGTCGTTCCCAATTATCCCAATTTATGGATCAAACGAATCCAATTGCGGAACTTACTCACAAAAGACGTTTATCTTCTTTGGGACCTGGTGGTTTGAATAGAGATCGAGCAGGCTTTGAAGTTCGTGACGTTCACCCAAGCCATTATGGAAGAATTTGTCCTATTGAAACACCTGAAGGACCAAACATTGGTTTGATCACTTCTTTATCAACATTTGCTAAAATCAATGAATTCGGTTTTATTGAAACACCTTATCGTATCGTAAGAGATGGAGTGGTAACTGAAGAAATTGAGTATATGACAGCTGATCAAGAAGAGCGTTGTGTGATCGCGCAGGCGTCAGCTCCACTTGATGAATATAACATGTTTAAAGAAGAAATATGTTGGGCCAGATATAGAGGGGAACCGCTTGAGATCGATACGACTCGCGTAACTCACATGGATGTTTCGCCAAAACAATTAGTTTCGATCGTTACAGGATTAATTCCGTTCTTAGAGCATGACGATGCTAACCGTGCTTTGATGGGTGCGAACATGCAACGTCAAGGTGTACCATTATTAAAGCCAGAAGCCCCAATCGTTGGTACTGGTTTAGAAGCTAGAGCGGCAAGAGACTCAGGTGCAGTTGTCATAGCTATAGAAGATGGAATCGTTGAATATGTAGACGGCTTAAAAATTGTCATTTCTTCTAAAGCCAACCGTATGGATAAGAAAACTTATATCTTGAAAAAGTTTTTACGTTCAAACGCAGGAACTTGTATTAACCAACAACCTTTATGTAGCGTTGGTGATGAAATTAAAGCCGGTGATGTGATAGCGGATGGTCCAGCGATCGATCATGGTGAAGTTGCTCTTGGTAAAAACGTGTTAGTCACATTTATGCCATGGCTTGGTTACAACTTTGAAGATGCTATTATAGTATCTGAAAAGCTTGTAAGAGAAGATGCGTTTACCTCAATCAATATTGAAGAATTTGAAGTTACCGCTCGCGATACAAAACTTGGAAAAGAAGAGATTACACGCGATATTCCAAACGTTTCTGAAGAAGCTCTAATTAATTTAGGCGACGATGGAATTATCCGCATCGGTGCTGAAGTTAAGCCAGGTGATATATTAGTTGGTAAAATTACACCAAAAACTGAAACAGAATTGGCGCCTGAAGAAAGACTTTTGCGTGCTATATTTGGTGAAAAAGCAGCTGATGTTAAAGATGCTTCTTTAGTTGTTCCTCCAGGCACTGAAGGGTATGTAAGAGACGTTAAAATTTTTAGTCGTCGTGAACGTGTTTCTAATAAGACTGATGATGAGTTAGTTGAAGAGGCAGCAAGGCTTAAAGAGTTACAAAAAGAATATAAGCAAAAGCAACTTGAACTCAAGATCGAAAGAAGAGAGCGTTTAGGTGCTTTATTGTTAAATGACTTAGCCCCAGGGACTATTGTCCATAGAAAAACAGCTGAAGTTATTTTGGATGAAGGTTCTTTAATTACTCAAGAAACAATAGAAGCCTTAGAGAAAGAAAATATTGAAGATTTGTTAATGCCAAACAACGACATTTACAATACTTTAAAACAAATCATTCATGAATCTGACATAAATTTACAAAAGCTTGAAACACAAATGAGAGCTGAAGTTGAATTTATGCGTAAAGGTGATATTGATTTAGATCCAGGTGTAATACGCCAAGTTAAAGTTTATATAGCTTCAAAGCGTAAACTTCAAGTTGGTGACAAAATGGCAGGACGTCACGGAAACAAAGGGGTAGTTTCTAAAATTGTTCCTGAAGCTGACATGCCATATTTATCTAATGGTCAACCAATTGAAGTAATTTTAAATCCGTTAGGCGTACCATCTCGTATGAATATAGGACAGCTTTTTGAAACCCACTTAGGTTTTGCAGCTAAGTTGTCAGGAATAAAAGTTGCAACTCCTGTATTCGAAGGTTTCCCAGAAAATAAAATTTGGGAAATGATGACAAAAGTTAATTTACCCTCAGATGGTAAATTTTATCTTTACGACGGATGTACAGGCGAGCGTTTTGATAATACAGTAGTGGTTGGCTATATTTACATCTTAAAACTAAGTCACTTAGTTGCTGATAAAATCCACGCACGCGCTGTTGGACCTTACTCTTTAGTAACGCAACAACCATTAGGTGGTAAAGCTCAAATGGGTGGCCAGCGTTTTGGAGAGATGGAAGTTTGGGCAGCAGAAGCTTATGGAGCCGCTCACTTACTCCAAGAATTGTTGACTGTAAAATCGGATGACGTATCAGGAAGAACACGTATTTACGAGTCCATTGTTAAAGGCGATAACCTCTTAACACCTGGAACTCCTGAATCGTTTAACGTATTGATGCACGAAATGAAAGGTTTAGCTCTCGATATTAGAGCAGAAGCTTTTACAGAAGAATAA
PROTEIN sequence
Length: 1256
MLKRPPKRVSFINKNEIIDLPNLIEIQVKSYDQFLQVDKFPDERENIGLQEVFNEMFPIKSYDEKTILEFISYSLGVPKYSAEECIRRGITYNVTLKVKFRLTDETGIKEEEVYMGTIPIMTDKGTFVINGAERVVVSQLHRSPGISFEHERSLRGSAIYSFRIIPYRGSWLEGAFDTNDLIYIYIDRKKRRRKILATTFIRALGFSSNSDIIEEFFSTKKEKIKSEKEFAKLVGKILAQDVIDEETGTIFGKAAEKLTTAMLKRMLDAGVEVIRIAEDADESHPIIKMLAKDSSDSYESALKDFYRKIRPGEPATLSNARSAMMRLFFDPRRYNLGRVGRYKLNSKLGLELTDEQLQVVTITKEDVIGALKYLIKLKQGKEDVSTDDIDHLGNRRVRSVGELIQNQCRIGLARMEKIIRERMNLFDFSSDTLTPGKIISAKGLSGVLKDFFGRSQLSQFMDQTNPIAELTHKRRLSSLGPGGLNRDRAGFEVRDVHPSHYGRICPIETPEGPNIGLITSLSTFAKINEFGFIETPYRIVRDGVVTEEIEYMTADQEERCVIAQASAPLDEYNMFKEEICWARYRGEPLEIDTTRVTHMDVSPKQLVSIVTGLIPFLEHDDANRALMGANMQRQGVPLLKPEAPIVGTGLEARAARDSGAVVIAIEDGIVEYVDGLKIVISSKANRMDKKTYILKKFLRSNAGTCINQQPLCSVGDEIKAGDVIADGPAIDHGEVALGKNVLVTFMPWLGYNFEDAIIVSEKLVREDAFTSINIEEFEVTARDTKLGKEEITRDIPNVSEEALINLGDDGIIRIGAEVKPGDILVGKITPKTETELAPEERLLRAIFGEKAADVKDASLVVPPGTEGYVRDVKIFSRRERVSNKTDDELVEEAARLKELQKEYKQKQLELKIERRERLGALLLNDLAPGTIVHRKTAEVILDEGSLITQETIEALEKENIEDLLMPNNDIYNTLKQIIHESDINLQKLETQMRAEVEFMRKGDIDLDPGVIRQVKVYIASKRKLQVGDKMAGRHGNKGVVSKIVPEADMPYLSNGQPIEVILNPLGVPSRMNIGQLFETHLGFAAKLSGIKVATPVFEGFPENKIWEMMTKVNLPSDGKFYLYDGCTGERFDNTVVVGYIYILKLSHLVADKIHARAVGPYSLVTQQPLGGKAQMGGQRFGEMEVWAAEAYGAAHLLQELLTVKSDDVSGRTRIYESIVKGDNLLTPGTPESFNVLMHEMKGLALDIRAEAFTEE*