ggKbase home page

SCNpilot_expt_1000_bf_scaffold_587_curated_46

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(42423..43229)

Top 3 Functional Annotations

Value Algorithm Source
Extensin family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA70_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 273.0
  • Bit_score: 208
  • Evalue 8.30e-51
Extensin-like protein {ECO:0000313|EMBL:CDP53308.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 224.0
  • Bit_score: 263
  • Evalue 4.00e-67
extensin similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 273.0
  • Bit_score: 208
  • Evalue 2.60e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGCTCCGTATTCCGGCCCCGATCGCACTCGTCCTGTTCCTGGCGCTCTCGGGCGCCGCCCCGGCTCAGGAGGAGCGGCCTCCCCTGCCCCGCGAGCGGCCGGAGCCGACCACAACCACCCAGGCGCCCGCGGGTCTCGACCTGCCGCGCGACCGGCCCGACCCGATGGGCGCGGCGCAGATCGCCGGCCCGGTGGCGCCGGCCGCTCCCGCCGAGCCGCCGGTGGAAGAGCCGGCCGCGCCGCCGCGCGACTATCAGGTCGCCTGCCCCGCCGTGCTCAATGGCGAGGTCACCGCCTCGGCGCTGCCGCCGATCCACGAGAATTTATGCGGGCTGCAATCGCCGCTGTCGCTCGAGGCGGTCAGCGCCAATGGCCGCTCGGTGCCGCTCAATGCGCCGGTCACCACCGATTGCGGCATGGCAACGGCACTGCCCGGCTGGGTGGCCGATGTCGACCGCTGGCTGATGGCGACCGAGGACACGCGCATCGAAACGGTGAATGTCGGCACCAATTACGCCTGCCGCAACGTCAACAATGCCAAGGGCGGCAATCTCAGCTTCCACGCCTTCGGCGATGCGCTCGACGTGATCGGCTTTTCGCTCGAGGACGGCCGCACGATCACCGTGGAGGCGGCCTGGCCGGGGACGGTCGAGCAGGGCAGCCGCATCATCCGCTTTGCGCATGACGCGGCGTGCACGCATTTCACCACCGTGCTCGGGCCCGAGGCCAACGAGCTTCACCGCGATCATCTGCATCTGGATCTGGGCTGCCATGGGCAGCGCTGCACGGCGCGGCTGTGTGAGTAG
PROTEIN sequence
Length: 269
MLRIPAPIALVLFLALSGAAPAQEERPPLPRERPEPTTTTQAPAGLDLPRDRPDPMGAAQIAGPVAPAAPAEPPVEEPAAPPRDYQVACPAVLNGEVTASALPPIHENLCGLQSPLSLEAVSANGRSVPLNAPVTTDCGMATALPGWVADVDRWLMATEDTRIETVNVGTNYACRNVNNAKGGNLSFHAFGDALDVIGFSLEDGRTITVEAAWPGTVEQGSRIIRFAHDAACTHFTTVLGPEANELHRDHLHLDLGCHGQRCTARLCE*