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SCNpilot_expt_1000_bf_scaffold_301_curated_59

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(54843..56864)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin D n=1 Tax=Rhizobium meliloti RepID=UPI0003719D63 similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 707.0
  • Bit_score: 215
  • Evalue 1.70e-52
Ca2+-binding protein, RTX toxin {ECO:0000313|EMBL:EIM29889.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 714.0
  • Bit_score: 212
  • Evalue 1.50e-51
probabable type I secretion target repeat protein similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 707.0
  • Bit_score: 210
  • Evalue 1.30e-51

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2022
ATGGCCACCGTCAGTTTTGCAACCAGCCCCGCCCCGTCGTTCGATCTGGGTGCAATCCTCCTGAACTATTCAGGGGTCAGCAGCGGCACATCGACGTACTGGTCCTGGGTCACGTCGGCCGCAACGCCGGTCAGCGTCAAACTCACCGGCACCGGCTTCCAGCACGGCCTCTACCCTATCGGCGGCACCGTCACCGGCTTCGAAGTCGATGTCGGCAATGATGGCGTGGTCGACGTTCGGGTGAGCGGCCTCAACTTCAACCTCAGGGACGCGAGTGACCCCCTCGTGGGAGGAGCGCTCGACGACAGCCAGGAGACCGACCTCCTGTGGTCGTTCGCCCTCAGGGGGGCGGACACGATCAACCTCCCGTCCACCTCCAGTCCGGTCAGTATCTTCGCGGGCGACGGGCGCCAGGGTTTGGCGGGCGCGGCCGACACTTTCACCGGGTCAACCTCGACGTACGCCGTCGGCGACTTTCTGTCGGTGAGCGGCAATGACACGATGACCGGCGGCAATGACACGATGACCGCGACGGGCGGCGACCTGGTTGGCGACGTTCCCATCGTCCGCCGTGCCCAATTCACGGGCGGCAACGACGTCCTCACCGCCGCCAGCGGCACGTCGGTCTATGGCGACGTGATAACCGTGGACGAGGGCGGCGTGACGGGCGGCCATGACAGCATCGTTGGCGCGGGGGGCGCGGAGACCCTCTATGGCGACGCAAAGAGTGTGACTGACGGTAGCCTCTACGGCGGCAACGACACTATCCGAGGAGGTGACGGCGCCGACACCATCTTCGGTGACGTGGAGACGACGGCCCTCGCCTCCGTGGTCGGTGGCGACGACCAGCTTTTTGGCGATGCGGGCGACGACAGGCTCATTGGCAATGGCGGCCACGACACGCTCGATGGCGGGAGCGGCAACGACACGCTTGATGGCGGCGACGGCGTCGACATCGCCGTCTATTCCGGCCGGTGGATCGACTACGACATCGTCGCCCAGTCCGGAGGCCAGTACTCGGTCATCGACCGCGTGGCCGGCCGCGACGGAACCGATACCGTTAAGGACATCGAGAGGATACGCTTCTCCGGCGATGGGAGGGTGCGGAGCATGGAGGGCGCGCTCAACGCTGCCCCCCTCGCGAACAACGACACCAACACCGCCGATCCGGTGGTCGAGGACAACGACCTGTTCGCCGCCGGCAATGTGCTCGTCAACGACACCGATGCCGACAGCGATTTCGGCGACGTCATGACCGTCAATGGCGTGCGCACCGGTACTGTGGCGGCCGGCGGCTCCTTCGCGGCAGCCGGCGGCGCGGGCATCAAGGGCACGTTCGGCACCCTGGTGATCGCCGCTGACGGCGCCTACACCTACACGCTCGACAATGCCGACCCCGACACACAGGCCATCCGCCCCGGCCAGACCGCCTCGGATGTCTTCAATTACCTCATCACCGACGCCAAGGGCCTCACCGCCACCGCCCTGGTGACCATCGCCATCGGCGGCGACACCGCCACCTCCATCAAGGGCAACAGCAAGGCCAACAGGATCGACACGATCAAGACCATCAAGGGCCTCGGTGCCACGGAGGAAGAGGACCGGATCGACGGCCGGCAGGGCAACGACACCATCAAGGGCGCCGGCGGCAACGACACCCTGATCGGCGGCGAAGGCAAGGACCAGCTCTATGGTGGCGCCGGCAGCGATGCCTTCGTGTTCAACACCAGGCTGGTGGCCACCAATGTCGACACCATCAGGGACTTCACCCACGACGTCGACCTGCTCATGCTTGACGACAAATACTTCAAGAAGATCGGCGCGGTCCTCGATGTGGGCGAGTTCTACGCCAAGGCGGGCGCCACCAAGGCGCACGACCGCGACGATCGCATCATCTACAACACCAAGAACGGCAAGCTCTATTTCGACCAGGACGGCAGCAAGGGCGGCCACGACGCCATCCATTTCGCCACGCTGAGCACCAAGCCGCTGCTCGACGCGGGCGACTTCCTCATCGTGTAA
PROTEIN sequence
Length: 674
MATVSFATSPAPSFDLGAILLNYSGVSSGTSTYWSWVTSAATPVSVKLTGTGFQHGLYPIGGTVTGFEVDVGNDGVVDVRVSGLNFNLRDASDPLVGGALDDSQETDLLWSFALRGADTINLPSTSSPVSIFAGDGRQGLAGAADTFTGSTSTYAVGDFLSVSGNDTMTGGNDTMTATGGDLVGDVPIVRRAQFTGGNDVLTAASGTSVYGDVITVDEGGVTGGHDSIVGAGGAETLYGDAKSVTDGSLYGGNDTIRGGDGADTIFGDVETTALASVVGGDDQLFGDAGDDRLIGNGGHDTLDGGSGNDTLDGGDGVDIAVYSGRWIDYDIVAQSGGQYSVIDRVAGRDGTDTVKDIERIRFSGDGRVRSMEGALNAAPLANNDTNTADPVVEDNDLFAAGNVLVNDTDADSDFGDVMTVNGVRTGTVAAGGSFAAAGGAGIKGTFGTLVIAADGAYTYTLDNADPDTQAIRPGQTASDVFNYLITDAKGLTATALVTIAIGGDTATSIKGNSKANRIDTIKTIKGLGATEEEDRIDGRQGNDTIKGAGGNDTLIGGEGKDQLYGGAGSDAFVFNTRLVATNVDTIRDFTHDVDLLMLDDKYFKKIGAVLDVGEFYAKAGATKAHDRDDRIIYNTKNGKLYFDQDGSKGGHDAIHFATLSTKPLLDAGDFLIV*