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SCNpilot_expt_1000_bf_scaffold_321_curated_95

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(94768..95046)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI000372C851 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 68.0
  • Bit_score: 64
  • Evalue 8.70e-08
uhpA; response regulator UhpA similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 78.0
  • Bit_score: 61
  • Evalue 2.30e-07
Response regulator TtrR {ECO:0000313|EMBL:EGV50916.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 81.0
  • Bit_score: 61
  • Evalue 6.10e-07

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Taxonomy

endosymbiont of Riftia pachyptila → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGCCGCAACACAGCTTCGACGACCTCTTGGACGACGTCCCCGAGCAGCGTCTCGCGAGGGTCCGCAGTGGCCTCGAGCGCCTGACGCCGCGTGAGCTCGAGGTGCTCAAGCGTGCCATCTCGGGCGAGACGGCCGGCGACTCGGCAGGCAATCTGGGCATCTCGGTCCGCACCGTCGAGCTCCACCGCCAGCAGGTCCTGGCCAAGCTTGAGGTCAAGAACCTCACCCAGGCCGTCCGCATGATTGCGCTGGCGCAGCGTCACCAGCCCTCGCGCTGA
PROTEIN sequence
Length: 93
MPQHSFDDLLDDVPEQRLARVRSGLERLTPRELEVLKRAISGETAGDSAGNLGISVRTVELHRQQVLAKLEVKNLTQAVRMIALAQRHQPSR*