ggKbase home page

SCNpilot_expt_1000_bf_scaffold_333_curated_67

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 60939..61718

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CCB22 similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 260.0
  • Bit_score: 356
  • Evalue 1.80e-95
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJM69354.1}; Flags: Precursor;; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 251.0
  • Bit_score: 204
  • Evalue 1.60e-49
potC; polyamine transport protein PotC similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 251.0
  • Bit_score: 195
  • Evalue 1.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. GM49 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGTGAGGGGCTCGCGCCTGTGGTCCTGGCTGTTCGTGGCGCTGGTCCTGTTCTACCTCTACGCGCCGATCCTCGTGATCGTGGTCTTCTCGTTCACCACGTCGCCACGGCTCAGCCTGCCGATCGAGGGGCTGACGCTCGACTGGTACGGCCGCGCCTTCGCCGATCCGCTCATTCCGATGGCGCTCAAGAACTCGGCCATCCTCGCGACCATCTCGGCGGTCGGCGGCGGTATCGCCGGAGCGGCGTTCGCCTTCGGGCTGGTGATGCTGCGCAATGGCCGGCTGCGCGCCTCGCTGCTGTCGATCAGCATGCTGCCCGCCATCGTGCCGCTGCTCGTCATCGGCATCGCACTTGCCGTGTTCTTCAGCACCATCGCGCTGCCGCAGGGGTTGATCGGCGCCGCCATCGGTCATGTGCTCGTCAGCCTGCCCTTCGTCATCCTCACGATGAATGCGCGGCTCGAGAGTTTCGACTTCTCCATCCTCGAAGCGGCGCGCGATCTTGGTGCGACCCGCTTCCAGGCGTTCCGCGACATCACGCTGCCGCTGATCCGTCCCTCGGTGGTCGGCGCAGCGCTGCTCGCTGCCGCGCTCTCGCTCGATGAGTTCGTCGTCACCTGGTTCAATATCGGCAGCCAGCAGACGGTGCCGACGCTGGTCTGGGGCCTCATGCGGCGCGGCATCGATCCATCGATCAATGCCATTGCGACGCTGCTGCTGGCGCTGCTCGTCTGCCTCGTCGTCGCCTCCAATTTGCTCAACAGAAGGAAGTCATAG
PROTEIN sequence
Length: 260
MVRGSRLWSWLFVALVLFYLYAPILVIVVFSFTTSPRLSLPIEGLTLDWYGRAFADPLIPMALKNSAILATISAVGGGIAGAAFAFGLVMLRNGRLRASLLSISMLPAIVPLLVIGIALAVFFSTIALPQGLIGAAIGHVLVSLPFVILTMNARLESFDFSILEAARDLGATRFQAFRDITLPLIRPSVVGAALLAAALSLDEFVVTWFNIGSQQTVPTLVWGLMRRGIDPSINAIATLLLALLVCLVVASNLLNRRKS*