ggKbase home page

SCNpilot_expt_1000_bf_scaffold_333_curated_126

Organism: scnpilot_dereplicated_Devosia_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(115918..116820)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of the Tol biopolymer transport system n=1 Tax=Rhizobium sp. CF142 RepID=J2B603_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 297.0
  • Bit_score: 349
  • Evalue 4.40e-93
Biopolymer transporter Tol {ECO:0000313|EMBL:KKB78943.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 297.0
  • Bit_score: 398
  • Evalue 6.80e-108
periplasmic component of the Tol biopolymer transport system similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 292.0
  • Bit_score: 316
  • Evalue 9.90e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCCGTCGCCGTTCACCCGCAAGTTCCGCTCGCTCCTGCCCGGCCAGCAGTCTGAACTGACGATCATCAATGCGGACGGAACGGACCGCGACGTGATCCTTGCCGTCGATGACGCGATCATCGAGGCGCCCAACTGGCACCCCGGCGGCGATTTCCTCGTGTTCAACGCCGGCGGCGAGATCTGGCGGATCAATGTCGACGGCACGGGGCTCAGCCGGATCGAGACCGGGACGATCCGCGACCTCAACAACGACCACGTGCTGTCGCCCGACGGGCGGACGATCTACCTCAGCAACCAGAGCGACGGCGCGCTCTATTCGGTGCCCATCGAGGGCGGCACGCCGACCAAGGTGTCCAACGACCACGCGACGCCACACCATTACTATCTCCACGGGATCTCACCCGACGGGACGACGCTGTCCTATGTCGCGGTCGAGGGGCCGGAGGGGAAGAAGCGGGTCAACATCTTCACCATCCCCGCCTCGGGCGGGCCGGACACGCGGCTCTCCGATGTGAGCTATCCCAATGACGGGCCGGAGTATTCGCCGGACGGCAGATGGATCTATTTCAGCAGCGAGCGCGACGCGACCGAGCCGGGCCACGCCCAGTGTTATCGCATGCGGCCCGACGGCAGCGGCATCGAGCGGCTCAGCACCAGCGAGCGGGTCGACTGGTTCCCGCACATCTCGCCCGACGGCACGCACTGCGTCTATATCAGCTACCCCAGGGGCACGCTCGGCCATCCGCCCGACAAGGATGTGCGGCTGATGCTGATGCCGTCCGACGGAAGCTGGCACAGGGAAATCATCGCCCTGTTCGGCGGCCAGGGGACGATCAACGTCAACAGCTGGGCCCCCGACAGCAAGCGCTTCGCCTATGTGGCCTATCCCGTGCTGAACTAG
PROTEIN sequence
Length: 301
MPSPFTRKFRSLLPGQQSELTIINADGTDRDVILAVDDAIIEAPNWHPGGDFLVFNAGGEIWRINVDGTGLSRIETGTIRDLNNDHVLSPDGRTIYLSNQSDGALYSVPIEGGTPTKVSNDHATPHHYYLHGISPDGTTLSYVAVEGPEGKKRVNIFTIPASGGPDTRLSDVSYPNDGPEYSPDGRWIYFSSERDATEPGHAQCYRMRPDGSGIERLSTSERVDWFPHISPDGTHCVYISYPRGTLGHPPDKDVRLMLMPSDGSWHREIIALFGGQGTINVNSWAPDSKRFAYVAYPVLN*