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SCNpilot_cont_1000_bf_scaffold_20_curated

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Displaying items 1-30 of 1002 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_20_curated_1

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3..233
DNA (231bp) protein (77aa)
panE; 2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
Predicted 2-dehydropantoate 2-reductase n=1 Tax=uncultured bacterium MedeBAC46A06 RepID=Q4PJC3_9BACT
Predicted 2-dehydropantoate 2-reductase {ECO:0000313|EMBL:AAY82854.1}; TaxID=332275 species="Bacteria; environmental samples.;" source="uncultured bacterium MedeBAC46A06.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

712..1947
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378D4EC
Uncharacterized protein {ECO:0000313|EMBL:KKB86111.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative oxidoreductase
SCNpilot_cont_1000_bf_scaffold_20_curated_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2038..2235
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037FF88C
Ferredoxin {ECO:0000313|EMBL:KKB86110.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
fdxD; ferredoxin FdxD
SCNpilot_cont_1000_bf_scaffold_20_curated_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2362..3567
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003666FB9
Uncharacterized protein {ECO:0000313|EMBL:KKB86130.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
NAD(FAD)-dependent dehydrogenase
SCNpilot_cont_1000_bf_scaffold_20_curated_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3625..4092
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379CE69
Uncharacterized protein {ECO:0000313|EMBL:KKB86109.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4178..5125)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A12D0
Uncharacterized protein {ECO:0000313|EMBL:EKS31090.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
LysR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_20_curated_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5401..6669
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371236E
Uncharacterized protein {ECO:0000313|EMBL:KKB86104.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_20_curated_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6666..8234
DNA (1569bp) protein (523aa)
amidase; K01426 amidase [EC:3.5.1.4]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C566A
Uncharacterized protein {ECO:0000313|EMBL:KKB86105.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8231..8608
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B7E48
Uncharacterized protein {ECO:0000313|EMBL:KKB86106.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein; K09966 hypothetical protein
SCNpilot_cont_1000_bf_scaffold_20_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8709..9467
DNA (759bp) protein (253aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370D27D
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIZ47878.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9505..10239
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037F68AB
Asp/Glu/hydantoin racemase {ECO:0000313|EMBL:KKB86107.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Asp/Glu racemase
SCNpilot_cont_1000_bf_scaffold_20_curated_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10314..11696
DNA (1383bp) protein (461aa)
chlorohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
UPI0003CF83B4 related cluster n=1 Tax=unknown RepID=UPI0003CF83B4
Chlorohydrolase {ECO:0000313|EMBL:CDX29538.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_13
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11739..14879
DNA (3141bp) protein (1047aa)
UPI0003CE077F related cluster n=1 Tax=unknown RepID=UPI0003CE077F
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:CDX29532.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit
SCNpilot_cont_1000_bf_scaffold_20_curated_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14876..15373
DNA (498bp) protein (166aa)
Putative xanthine dehydrogenase subunit E {ECO:0000313|EMBL:CDX29529.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CDX29529.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
xdhA; xanthine dehydrogenase; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
UPI0003CE7AEC related cluster n=1 Tax=unknown RepID=UPI0003CE7AEC
SCNpilot_cont_1000_bf_scaffold_20_curated_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16157..17272
DNA (1116bp) protein (372aa)
UPI0003CF8321 related cluster n=1 Tax=unknown RepID=UPI0003CF8321
Membrane protein {ECO:0000313|EMBL:ESW94142.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
basic membrane lipoprotein
SCNpilot_cont_1000_bf_scaffold_20_curated_16
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17288..18889
DNA (1602bp) protein (534aa)
sugar ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
UPI0003CF3467 related cluster n=1 Tax=unknown RepID=UPI0003CF3467
ABC transporter {ECO:0000313|EMBL:ESW94141.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18892..19938
DNA (1047bp) protein (349aa)
UPI0003CE49B6 related cluster n=1 Tax=unknown RepID=UPI0003CE49B6
Sugar ABC transporter {ECO:0000313|EMBL:ESW94140.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
sugar ABC transporter; K02057 simple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_20_curated_18
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19941..20876
DNA (936bp) protein (312aa)
UPI0003CE5E4F related cluster n=1 Tax=unknown RepID=UPI0003CE5E4F
Sugar ABC transporter {ECO:0000313|EMBL:ESW94139.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_20_curated_19
Gluconobacter thailandicus, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21086..22438
DNA (1353bp) protein (451aa)
hydroxydechloroatrazine ethylaminohydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00038185E6
Amidohydrolase {ECO:0000313|EMBL:GAC88135.1}; TaxID=1291534 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter thailandicus NBRC 3255.;"
amidohydrolase
SCNpilot_cont_1000_bf_scaffold_20_curated_20
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22500..23957
DNA (1458bp) protein (486aa)
h16_A3075; dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2]
Dihydropyrimidinase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYW8_9PROT
Dihydropyrimidinase {ECO:0000313|EMBL:EHM01686.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_21
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24429..25085
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GG08_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC54710.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_20_curated_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25092..26681)
DNA (1590bp) protein (530aa)
Alcohol dehydrogenase (Acceptor) {ECO:0000313|EMBL:CDX35830.1}; EC=1.1.99.- {ECO:0000313|EMBL:CDX35830.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Glucose-methanol-choline oxidoreductase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y851_MESOW
glucose-methanol-choline oxidoreductase
SCNpilot_cont_1000_bf_scaffold_20_curated_23
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26686..28188)
DNA (1503bp) protein (501aa)
aldehyde dehydrogenase (EC:1.2.1.3)
UPI0003CE9D29 related cluster n=2 Tax=unknown RepID=UPI0003CE9D29
Aldehyde dehydrogenase {ECO:0000313|EMBL:ESX87119.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
SCNpilot_cont_1000_bf_scaffold_20_curated_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28408..29304
DNA (897bp) protein (299aa)
UPI0003CF6697 related cluster n=2 Tax=unknown RepID=UPI0003CF6697
Uncharacterized protein {ECO:0000313|EMBL:CDX51448.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_20_curated_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29360..29947
DNA (588bp) protein (196aa)
Polyisoprenoid-binding protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7HB66_9RHIZ
YceI family protein {ECO:0000313|EMBL:CDX35824.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
YceI family protein
SCNpilot_cont_1000_bf_scaffold_20_curated_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30112..30900
DNA (789bp) protein (263aa)
UPI0003CDE579 related cluster n=1 Tax=unknown RepID=UPI0003CDE579
Protein MoaE {ECO:0000313|EMBL:CDX51453.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_bf_scaffold_20_curated_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30917..31711
DNA (795bp) protein (265aa)
Molybdenum cofactor biosynthesis protein F n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y856_MESOW
Molybdenum cofactor biosynthesis protein F {ECO:0000313|EMBL:CDX14143.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Molybdenum cofactor biosynthesis protein F
SCNpilot_cont_1000_bf_scaffold_20_curated_28
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31728..32117
DNA (390bp) protein (130aa)
UPI0003CE0452 related cluster n=1 Tax=unknown RepID=UPI0003CE0452
Ketosteroid isomerase {ECO:0000313|EMBL:ESY78111.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_20_curated_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32175..33383
DNA (1209bp) protein (403aa)
UPI0003CDE31A related cluster n=1 Tax=unknown RepID=UPI0003CDE31A
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDX14148.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_20_curated_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33703..34440
DNA (738bp) protein (246aa)
UPI0003CF46F0 related cluster n=1 Tax=unknown RepID=UPI0003CF46F0
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX51461.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Displaying items 1-30 of 1002 in total

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