ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_1000_bf_scaffold_20_curated_76

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(86721..87386)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF8A73 related cluster n=1 Tax=unknown RepID=UPI0003CF8A73 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 222.0
  • Bit_score: 391
  • Evalue 7.40e-106
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY73282.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 222.0
  • Bit_score: 391
  • Evalue 1.00e-105
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 222.0
  • Bit_score: 389
  • Evalue 8.90e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTCAGAGAGCCCCAGGGAAACGATTGCCGTCCGCATCAGCAAGGTGCTGGCGGAGCGTATTATTTCGGGCGCGATCGACCCCGGCACGAGGTTGCGGCAGGACCATATCGCCGAGGAATTCCAGACCAGCCACGTGCCGGTGCGCGAGGCCTTCCGCCGTCTGGAGGCGCAGGGGCTTGCCGTCAGCGAGCCGCGCCGGGGCGTGCGAGTCGCCGCCTTCGACCTCGGCGAGGTCAAGGAAGTGGCGGAGATGCGCGCCGCGCTCGAGGTCCTGGCGCTGCGCCATGCCGTGCCGCACCTTACCCCGGCCATACTGGACCTCGCCGAGGAGGCGACACGCGCCGGCGACAGGTCGCGCGACGTCCGCTCCTGGGAAGAAGCAAACCGCGCCTTCCACCGGCTGATCCTGTCGCCCTGCGCCATGCCCCGCCTTTTGTCCACCATCGACGACCTGCACGCGGCCAGCGCCCGCTTCCTGTTCGCGGCCTGGCGATCGGAATGGGAAACCCGCACCGATCAGGACCATCGCGTCATCCTCGCCGCGCTCCGCCAGGGAAACGTCGATTCGGCCGCCGCCACGCTCGGCAGGCATGTGCAGTGGATCGGCCGCAAGCCGATCAGGACATCATCCGGCACCCGCGAGGCTTTCACCATCGTCGGCTGA
PROTEIN sequence
Length: 222
MSESPRETIAVRISKVLAERIISGAIDPGTRLRQDHIAEEFQTSHVPVREAFRRLEAQGLAVSEPRRGVRVAAFDLGEVKEVAEMRAALEVLALRHAVPHLTPAILDLAEEATRAGDRSRDVRSWEEANRAFHRLILSPCAMPRLLSTIDDLHAASARFLFAAWRSEWETRTDQDHRVILAALRQGNVDSAAATLGRHVQWIGRKPIRTSSGTREAFTIVG*