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SCNpilot_expt_1000_bf_scaffold_878_curated_43

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(40138..42153)

Top 3 Functional Annotations

Value Algorithm Source
PTS system mannitol-specific transporter subunit IIC; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 706.0
  • Bit_score: 685
  • Evalue 1.80e-194
PTS mannose transporter subunit IIA n=1 Tax=Nesterenkonia sp. F RepID=UPI000255D526 similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 715.0
  • Bit_score: 751
  • Evalue 6.50e-214
Putative mannitol-specific phosphotransferase system enzyme II {ECO:0000313|EMBL:GAB90039.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 689.0
  • Bit_score: 700
  • Evalue 2.40e-198

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Taxonomy

Gordonia rhizosphera → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2016
ATGACGACGACGTCACCCGCAACGACCTCGGGCGGAGCCCGCGTTCGCGTGCAGAGATTCGGCACATTCCTGTCCGGCATGATCATGCCGAATATCGCCGCCTTCATCGCCTGGGGCATCATCACTGCCCTGTTCATCGACAAGGGCTGGGTCGGCAACGACGGCCCCATCGAGGCATGGCGCTGGGCGAACTCCGCGATCCTCGGTGGAGGCACCATCGGTGACGTCGACTACACGGGCCTGGTCGGCCCGATCATCAACTACCTGCTGCCCCTGCTGATCGCCTTCACCGGCGGACGCATGGTGCATGGGCACCGCGGCGGCGTGGTCGGAGCGGTCGCAGCCTTCGGCGTGATCATCGGAGCCGAAGGCACCGTGATGTTCCTGGGCGCCATGATCGCGGGCCCCCTCACGGCGCTCATCCTGAAGTGGGTCGAGAAGCCGTGGCAGGGCAAGATCAAGCCGGGCTTCGAGATGCTCGTGGACAACTTTTCGGCGGGCTTCGTAGCCTTCTTCGCCTCGCTGGCGGCGTTCTTCTGGCTGGCGCCCCTCATGAAGTGGGTCACCGACATCCTCGGCGGTGCCGTGGGCTGGCTGGTCGAGACGCACCTGCTGCCGCTGGCGAGCATCATCGTCGAGCCGGCGAAGGTGCTGTTCCTGAACAATGCCATCAACCACGGCGTGTTCACACCGCTGGGCACCGAGCAGTCCTCGCAGACCGGCAAGAGCCTGCTGTTCCTGATCGAGGCGAACCCCGGGCCGGGCCTCGGTCTCCTGATGGCGATCACTGTGTTCGGTGTGGGTGCTGCTCGCGCCACCGCGCCGGGAGCAGCCATCATCCAGTTCCTCGGCGGAATCCACGAGGTCTACTTCCCCTACGTGCTGGCCAAGCCCACACTGATCATCGGGCTGATCGCCGGGGGCGCCACGGGGGTGCTGACCAACGTGATCTTCCAGTCCGGCCTGGTCGCCCCCGCCGCCCCCGGCTCGATCTTCGCCGTGCTGTTCCAGATCGCTCCGGGAAGCCACGTCGGCGTGCTGCTGTCGGTGATCCTCGCGGCGGCGGTGACCTTCATCGTCTGCATGCCGATCCTGCTCGCCAGCCGGCGTCGAGACCTGGCCGCCGAGGGCGGGGATGCCGCCTTCACCGCCGCGATCGCGCAGACCGAGGCCAACAAGGGCAAGAAGTCCAGTGTGCTGGGCACGCTGGGGGGTGTCGGAACCGCGACGCTCACCCGCCCGGTGGAGAGCATCGTGTTCGCCTGCGACGCGGGCATGGGCTCCTCCGCAATGGGCGCGAGCGTGCTGCGCAACAAGATCAAGCAGGCCGGGATCACCGGCGTGACCGTCGTCAACCAGGCGATCGCCAACCTCGATGGCACCGCCGACCTGGTGATCACCCAACAGCAGCTGACCGACCGCGCCAGGGCGCAGTCGCCGGACTCCATGCACGTCTCCGTCGACAACTTCATGAACTCGCCTAAGTACGACGAGGTCGTGGAGCTGGTGCGCTCGCAAGGCGCAGAGGGCGCCGCGGCACAGCCTGCGGCAGCATCCGACGCGCAGACCGAACCCGGCGCGCCCGCCGTCCTCACCGCCGACCGCGTGCGCATCCACCCCGGATCCGCCACCCGCGACGAAGCGCTGAAGGAGGCCGCGGACGTGCTGGTGGCCGCCGGCGCCGTCACGCCCGACTACCTGCAGGCCATGCACGACCGAGAGAAGTCGGTGTCGACCTTCATGGGCAACGGGCTGGCGATCCCGCACGGCACCAACGAGGCGAAGGACGCCGTGCTCGGCTCCGCGCTCAGCGTGGTCCGCTACGACGGTGGAGTGGACTGGGACGGCGACCGCGCCACGTTCGTGATCGGCATCGCGGGCAAGGACGGTGCGCACCTGCAGATCCTCTCCAGCATCGCCGAGCTGTTCTCCGACGAGGACGACGTGGCCGCGCTCAACGCCGCGGCGACGCCCGAGGAGCTCTTCGCGCTGCTGTCGGCGGTGAACGAGGCATGA
PROTEIN sequence
Length: 672
MTTTSPATTSGGARVRVQRFGTFLSGMIMPNIAAFIAWGIITALFIDKGWVGNDGPIEAWRWANSAILGGGTIGDVDYTGLVGPIINYLLPLLIAFTGGRMVHGHRGGVVGAVAAFGVIIGAEGTVMFLGAMIAGPLTALILKWVEKPWQGKIKPGFEMLVDNFSAGFVAFFASLAAFFWLAPLMKWVTDILGGAVGWLVETHLLPLASIIVEPAKVLFLNNAINHGVFTPLGTEQSSQTGKSLLFLIEANPGPGLGLLMAITVFGVGAARATAPGAAIIQFLGGIHEVYFPYVLAKPTLIIGLIAGGATGVLTNVIFQSGLVAPAAPGSIFAVLFQIAPGSHVGVLLSVILAAAVTFIVCMPILLASRRRDLAAEGGDAAFTAAIAQTEANKGKKSSVLGTLGGVGTATLTRPVESIVFACDAGMGSSAMGASVLRNKIKQAGITGVTVVNQAIANLDGTADLVITQQQLTDRARAQSPDSMHVSVDNFMNSPKYDEVVELVRSQGAEGAAAQPAAASDAQTEPGAPAVLTADRVRIHPGSATRDEALKEAADVLVAAGAVTPDYLQAMHDREKSVSTFMGNGLAIPHGTNEAKDAVLGSALSVVRYDGGVDWDGDRATFVIGIAGKDGAHLQILSSIAELFSDEDDVAALNAAATPEELFALLSAVNEA*