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SCNpilot_expt_1000_bf_scaffold_878_curated

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_878_curated_31
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27042..28568
DNA (1527bp) protein (509aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNX8_9MICO
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHK99500.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_32
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28565..29932
DNA (1368bp) protein (456aa)
ABC transporter permease n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D7B52
Uncharacterized protein {ECO:0000313|EMBL:EPD86771.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
putative sugar ABC transporter permease; K02057 simple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_878_curated_33
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29929..31206
DNA (1278bp) protein (426aa)
ABC transporter permease n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037B5AE5
Inner membrane ABC transporter permease protein YjfF {ECO:0000313|EMBL:KJQ54544.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
ABC transporter permease; K02057 simple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_878_curated_34
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31249..31647
DNA (399bp) protein (133aa)
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
cytidine deaminase n=1 Tax=Microbacterium barkeri RepID=UPI0002F024F4
Cytidine deaminase {ECO:0000313|EMBL:KDA06044.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_35
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31644..32936
DNA (1293bp) protein (431aa)
deoA; thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4]
Pyrimidine-nucleoside phosphorylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLY8_9MICO
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EQM78259.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_36
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32956..34071
DNA (1116bp) protein (372aa)
Aminodeoxyfutalosine deaminase {ECO:0000313|EMBL:KJL28946.1}; EC=3.5.4.- {ECO:0000313|EMBL:KJL28946.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
add; adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNX4_9MICO
SCNpilot_expt_1000_bf_scaffold_878_curated_37
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34080..34934
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DBE76
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95802.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
PfkB domain-containing protein
SCNpilot_expt_1000_bf_scaffold_878_curated_38
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(34950..35894)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003480280
nucleotide-sugar epimerase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_878_curated_39
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35891..36859)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ABBB6
Sodium Bile acid symporter family protein {ECO:0000313|EMBL:KJL34654.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
bile acid:sodium symporter
SCNpilot_expt_1000_bf_scaffold_878_curated_40
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36859..38130)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLY3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM78254.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
faD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_expt_1000_bf_scaffold_878_curated_41
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38218..38937)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FE8E5
Uncharacterized protein {ECO:0000313|EMBL:EKM98374.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein; K07090
SCNpilot_expt_1000_bf_scaffold_878_curated_42
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38981..40141)
DNA (1161bp) protein (387aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
mtlD; mannitol-1-phosphate/altronate dehydrogenase; K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1E9_9MICO
SCNpilot_expt_1000_bf_scaffold_878_curated_43
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40138..42153)
DNA (2016bp) protein (672aa)
PTS system mannitol-specific transporter subunit IIC; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component
PTS mannose transporter subunit IIA n=1 Tax=Nesterenkonia sp. F RepID=UPI000255D526
Putative mannitol-specific phosphotransferase system enzyme II {ECO:0000313|EMBL:GAB90039.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_44
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42187..43335)
DNA (1149bp) protein (383aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ptsI; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347D6D2
SCNpilot_expt_1000_bf_scaffold_878_curated_45
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43795..44073)
DNA (279bp) protein (93aa)
phosphotransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002DC8E7C
Phosphotransferase {ECO:0000313|EMBL:KDA06052.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
SCNpilot_expt_1000_bf_scaffold_878_curated_46
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44076..44393)
DNA (318bp) protein (106aa)
phosphotransferase system cellobiose-specific component IIB; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
Phosphotransferase system cellobiose-specific component IIB n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCC4_MICTS
PTS sugar transporter {ECO:0000313|EMBL:KDA06053.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_47
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44555..46465
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIX9_9MICO
Putative licABCH operon regulator {ECO:0000313|EMBL:KJQ54557.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
transcriptional antiterminator; K03491 lichenan operon transcriptional antiterminator
SCNpilot_expt_1000_bf_scaffold_878_curated_48
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46452..46718)
DNA (267bp) protein (89aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:KJL23833.1}; EC=2.7.11.- {ECO:0000313|EMBL:KJL23833.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348096F
phosphotransferase system, phosphocarrier protein HPr; K11189 phosphocarrier protein
SCNpilot_expt_1000_bf_scaffold_878_curated_49
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46715..48394)
DNA (1680bp) protein (560aa)
Putative phosphomannomutase {ECO:0000313|EMBL:KJL23832.1}; EC=5.4.2.8 {ECO:0000313|EMBL:KJL23832.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
cpsG; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR1_9MICO
SCNpilot_expt_1000_bf_scaffold_878_curated_50
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48391..49224)
DNA (834bp) protein (278aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
deoD; purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
purine nucleoside phosphorylase n=1 Tax=Microbacterium barkeri RepID=UPI000309D3A5
SCNpilot_expt_1000_bf_scaffold_878_curated_51
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49326..50765
DNA (1440bp) protein (480aa)
lpdA; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNW2_9MICO
Flavoprotein disulfide reductase {ECO:0000313|EMBL:KDA06056.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_52
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50832..52601)
DNA (1770bp) protein (590aa)
Biotin carboxylase {ECO:0000313|EMBL:KJL34647.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KJL34647.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
accC; acetyl/propionyl-CoA carboxylase, alpha subunit; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14]
acetyl-CoA carboxylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347C051
SCNpilot_expt_1000_bf_scaffold_878_curated_53
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52672..53328)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003473418
Maf-like protein RU09_00140 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
nucleotide-binding protein; K06287 septum formation protein
SCNpilot_expt_1000_bf_scaffold_878_curated_54
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53370..54566
DNA (1197bp) protein (399aa)
Putative RNA methyltransferase/cg2084 {ECO:0000313|EMBL:KJL23168.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJL23168.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
SAM-dependent methyltransferase; K00599 [EC:2.1.1.-]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000374F0F4
SCNpilot_expt_1000_bf_scaffold_878_curated_55
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54616..55278
DNA (663bp) protein (221aa)
LuxR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002E0F00A
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDA06058.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
SCNpilot_expt_1000_bf_scaffold_878_curated_56
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55268..56503
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BEC9B
Uncharacterized protein {ECO:0000313|EMBL:KJQ54566.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_878_curated_57
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56534..57535
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EE9AA0
Uncharacterized protein {ECO:0000313|EMBL:KJQ54567.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_878_curated_58
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57823..58041)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003458D8E
Uncharacterized protein {ECO:0000313|EMBL:EYT58478.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_59
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58055..59071)
DNA (1017bp) protein (339aa)
pccB; acetyl-CoA carboxylase, carboxyltransferase component; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
methylmalonyl-CoA carboxyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002D57CDC
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95826.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_878_curated_60
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59150..59377
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Mycobacterium tuberculosis RGTB423 RepID=H8I3Z3_MYCTU
hypothetical protein
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
Displaying items 31-60 of 63 in total

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