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SCNpilot_expt_1000_bf_scaffold_878_curated_55

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 54616..55278

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002E0F00A similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 219.0
  • Bit_score: 362
  • Evalue 2.80e-97
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDA06058.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 220.0
  • Bit_score: 365
  • Evalue 4.70e-98
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 221.0
  • Bit_score: 315
  • Evalue 1.20e-83

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGAGCACCGTCGCCCTCATCGACGACCACGAGTCGGTTCGTCTGGGACTCGAGGCCGCCTGTCAGCGTGACGGCGAGCAGGACGTCGTCTTCTCCGGAGCCACCGTCCGGGAGTACCTCGCCTGGCGTGCGGCGTCAGGCGCCCGGCCCGCCGACGTGGTGGTGCTGGATCTCACGCTCGGCGACGGCACGACAGTCACCGAGAACGTCGCGACGCTGGTGGCCGACGGTGCGAGCGTTGTCATCCACAGCGTCGCCGACCGTCCGGCATCCGTGCGGGAGGCGCTCGTCGCAGGAGCGGCGGGCGTGGTCAGCAAGTCGTCCGCGCTGGACGACGTGCTCGACGCGATCCGCACCGTCGCGCGGGGAGAAGCGCTGAACAACGTCGAGTGGGCCAGCGCCGTGGACGGCGACCGCGAGTTCGCCGATGCCCAGCTGTCCGTCCGTGAGCGCGAGGTGCTGCGCCTGTATGCGACTGGGCTGCCGCTCAAGGCGGTCGCGGAGCGGCTGGGTGTGGCGTACTCGACCGCGAAGGAGAACATCTCCCGCGTCCGGGTGAAGTACGTCGAGGTGGGGCGTCCTGCATCGACCAAGATGGATCTGCTGCGCCGGGCGATGGAGGACGGCATCGTCGCGCCGGAGGGCCTGACGAGTGCAGGGTGA
PROTEIN sequence
Length: 221
MSTVALIDDHESVRLGLEAACQRDGEQDVVFSGATVREYLAWRAASGARPADVVVLDLTLGDGTTVTENVATLVADGASVVIHSVADRPASVREALVAGAAGVVSKSSALDDVLDAIRTVARGEALNNVEWASAVDGDREFADAQLSVREREVLRLYATGLPLKAVAERLGVAYSTAKENISRVRVKYVEVGRPASTKMDLLRRAMEDGIVAPEGLTSAG*