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SCNpilot_expt_1000_bf_scaffold_1202_curated_31

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(24122..25348)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34195 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 410.0
  • Bit_score: 322
  • Evalue 7.80e-85
Uncharacterized protein {ECO:0000313|EMBL:KHK97564.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 391.0
  • Bit_score: 477
  • Evalue 2.00e-131
hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 404.0
  • Bit_score: 279
  • Evalue 1.80e-72

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGACGAGCCGCATCGAGGATGCGTTCCGCGCCGACGCGGGACGCATCCTCGGGGCGGTCACCGCGTACACCGGCGACCTGCAGCTGGCCGAGGACGCCGTGCAGGACGCCTTCCTCCGGGCCATCGCGCAGGAGAGGGCCGGTGCGGAGCTGCGCGCGCCGTCGGCCTGGATCACCACCGCGGCGCGCCGTATCGCCGTCGACGCGATCCGGCGCGAGCGCACCGCCGCCCGTGCCCTGCCCACCTTGGCGGCGGATGCCCGGATCGTCGACGACGCCGATCTGGACGCGTTCTCCTTCACCGGGGACGAGAGGCTCGAGCTCATCCTGACGGTCTGCCATCCCGACCTCCCGGAGGAGCCGAGGCTCGCACTCGCGCTGCGCTTCGCGTGCGGCGTCCCGACCCGCGAGGTCGCGGCCATGCTGCTGGTGTCGGAGACGACGATGGCGGCGAGGCTGACCCGCGCCAAGAAGCGCCTGCACGACTCCGAGATCCGCTTCGCAGTGAGGGACGACGAGCAGGTGCGCACGCGCATGCCCGACGCCCTGTCCGTGATCGCCCTGCTCTACACGACGGGCTATGCGGCGCCGACGAGCGCTGAGGGGCGCGTGCTCTGCGGCGACGCCGTCGACCTCGCCAGGGACGCGCTGCGCATCGCGGGCGACGACGCCGAGGCGCAGGGACTGCTCGCCCTGGTGCTGCTCACCGAGGCGCGGCGTCCCTCGAGGGTCGACCCCTCGGGCGAACTGGTCGCCCTCGCCGAGGCGGACCGGGCGCTGTGGGACCGACGGCTGATCGCGGAGGGGGAGCGCCTCGCCACGGGTGCGCTGCAGCACGGGACGGGGCGCTTCGCGCTGCAGGCGGGTATCGCCGGGCTGCACGCGATCGCGCCGACGTGGGAGGCGACGGACTGGTCGTCGATCGCGCGGCTCTACGACGGACTGGTCGAGCAGTGGCCATCGCCGTCGGCGCGGCTGGCGAGGATCGTCGCCCGCGGGTATGCGGAGGGGATCGGGGCCGAGGGGGTCCGTCTGGAGCTGGACGCGGACGAGGTGCTGTTCCAGGGGCCACTGGCGGCGCAGGCCTTCGCCGTGCGCGGCGAGCTCGGCATCCGCTGCGGCGACACGGCAGGAGCACGACGCGACCTGCGTGAGGCGATCGGGCTCACCGAGGACCCGGCGGTGCGCCGGCATCTGGAGCGTCGGCTGCTCGCCGTGGGCGCCTAG
PROTEIN sequence
Length: 409
MTSRIEDAFRADAGRILGAVTAYTGDLQLAEDAVQDAFLRAIAQERAGAELRAPSAWITTAARRIAVDAIRRERTAARALPTLAADARIVDDADLDAFSFTGDERLELILTVCHPDLPEEPRLALALRFACGVPTREVAAMLLVSETTMAARLTRAKKRLHDSEIRFAVRDDEQVRTRMPDALSVIALLYTTGYAAPTSAEGRVLCGDAVDLARDALRIAGDDAEAQGLLALVLLTEARRPSRVDPSGELVALAEADRALWDRRLIAEGERLATGALQHGTGRFALQAGIAGLHAIAPTWEATDWSSIARLYDGLVEQWPSPSARLARIVARGYAEGIGAEGVRLELDADEVLFQGPLAAQAFAVRGELGIRCGDTAGARRDLREAIGLTEDPAVRRHLERRLLAVGA*