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SCNpilot_expt_1000_bf_scaffold_1202_curated

Search features with annotation key words

Displaying items 31-60 of 203 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1202_curated_31
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24122..25348)
DNA (1227bp) protein (409aa)
RNA polymerase subunit sigma-24 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34195
Uncharacterized protein {ECO:0000313|EMBL:KHK97564.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_1202_curated_32
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25363..25728)
DNA (366bp) protein (122aa)
DGPF domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPR8_LEIAQ
DGPF domain protein {ECO:0000313|EMBL:ERK70836.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
YCII-like protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_33
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(25908..27527)
DNA (1620bp) protein (540aa)
3-phosphoglycerate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002D6BEEB
D-3-phosphoglycerate dehydrogenase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1202_curated_34
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27658..28011)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031FA8F6
Uncharacterized protein {ECO:0000313|EMBL:KJL28137.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_35
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28008..28514)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000365678D
Uncharacterized protein {ECO:0000313|EMBL:KDA05769.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
DNA polymerase III, gamma/tau subunits
SCNpilot_expt_1000_bf_scaffold_1202_curated_36
unknown

Not on your lists

comp(28556..29320)
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1202_curated_37
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29530..30087)
DNA (558bp) protein (186aa)
CutC family protein n=2 Tax=Microbacterium RepID=H8E491_9MICO
Copper homeostasis protein CutC {ECO:0000313|EMBL:KJL30731.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
CutC family protein; K06201 copper homeostasis protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_38
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30367..31632)
DNA (1266bp) protein (422aa)
alpha-L-fucosidase; K01206 alpha-L-fucosidase [EC:3.2.1.51]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037E4FCC
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1202_curated_39
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31768..32817
DNA (1050bp) protein (350aa)
iron ABC transporter substrate-binding protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003700B79
Fe(3+)-binding periplasmic protein {ECO:0000313|EMBL:KJL19542.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_40
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32960..34420
DNA (1461bp) protein (487aa)
iron ABC transporter permease n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00037D6636
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:KJL30748.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_41
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34417..35538
DNA (1122bp) protein (374aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
sugar ABC transporter n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003754E1E
SCNpilot_expt_1000_bf_scaffold_1202_curated_42
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35594..36622)
DNA (1029bp) protein (343aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ilvC; ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
ketol-acid reductoisomerase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496963
SCNpilot_expt_1000_bf_scaffold_1202_curated_43
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36701..37210)
DNA (510bp) protein (170aa)
Putative acetolactate synthase small subunit {ECO:0000313|EMBL:KJL19538.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJL19538.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ilvH; acetolactate synthase, small (regulatory) subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
acetolactate synthase n=1 Tax=Microbacterium yannicii RepID=UPI000317D334
SCNpilot_expt_1000_bf_scaffold_1202_curated_44
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(37213..39018)
DNA (1806bp) protein (602aa)
ilvB; thiamine pyrophosphate-requiring enzyme; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K339_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1202_curated_45
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39307..40851)
DNA (1545bp) protein (515aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ilvD; dihydroxyacid dehydratase/phosphogluconate dehydratase; K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037912CF
SCNpilot_expt_1000_bf_scaffold_1202_curated_46
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40861..41658)
DNA (798bp) protein (266aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
trehalose-6-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFK8_9MICO
SCNpilot_expt_1000_bf_scaffold_1202_curated_47
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41655..43076)
DNA (1422bp) protein (474aa)
Trehalose-phosphate synthase {ECO:0000313|EMBL:KJL18507.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJL18507.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000315F1D8
SCNpilot_expt_1000_bf_scaffold_1202_curated_48
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(43124..44344)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346AF59
Major Facilitator Superfamily transporter
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1202_curated_49
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44481..44759
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDL0_9MICO
NADH:ubiquinone oxidoreductase {ECO:0000313|EMBL:KDA05775.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
SCNpilot_expt_1000_bf_scaffold_1202_curated_50
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44864..46042)
DNA (1179bp) protein (393aa)
Putative acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KJQ53041.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KJQ53041.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI00031FFA1D
SCNpilot_expt_1000_bf_scaffold_1202_curated_51
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46039..46692)
DNA (654bp) protein (218aa)
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Microbacterium yannicii RepID=UPI0002F8BB0C
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:KDA05777.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_52
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46694..47473)
DNA (780bp) protein (260aa)
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C09B9
Lipoprotein {ECO:0000313|EMBL:KDA05778.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_53
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47548..48372
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K333_9MICO
HTH-type transcriptional regulator KipR {ECO:0000313|EMBL:KJL19528.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1202_curated_54
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48373..49263)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F6ADE
Alpha/beta hydrolase {ECO:0000313|EMBL:KDA05779.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
alpha/beta hydrolase fold protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_55
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49263..50015)
DNA (753bp) protein (251aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C4645
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KDA05780.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_56
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50012..50713)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377CB29
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA05781.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1202_curated_57
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50697..52223)
DNA (1527bp) protein (509aa)
AMP-dependent synthetase/ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003821B8C
Acid--CoA ligase {ECO:0000313|EMBL:KDA05782.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_58
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52220..53320)
DNA (1101bp) protein (367aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E471_9MICO
ABC transporter permease {ECO:0000313|EMBL:KDA05783.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_59
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53323..54198)
DNA (876bp) protein (292aa)
ABC transporter permease n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379E7E7
ABC transporter permease {ECO:0000313|EMBL:KDA05784.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_60
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54195..54905)
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037414F8
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KDA05785.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter related protein; K01996 branched-chain amino acid transport system ATP-binding protein
Displaying items 31-60 of 203 in total

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