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SCNpilot_expt_1000_bf_scaffold_1202_curated

Search features with annotation key words

Displaying items 91-120 of 203 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1202_curated_91
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(76665..76853)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKX1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75931.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_92
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77365..78036)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGN5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM75933.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_93
unknown

Not on your lists

comp(78029..78262)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1202_curated_94
unknown

Not on your lists

78438..78659
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1202_curated_95
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79449..79661
DNA (213bp) protein (71aa)
Histidinol-phosphatase {ECO:0000313|EMBL:KJL17904.1}; EC=3.1.3.15 {ECO:0000313|EMBL:KJL17904.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
archaeal fructose-1,6-bisphosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KV78_9MICO
SCNpilot_expt_1000_bf_scaffold_1202_curated_96
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79669..80277
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034500AD
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88575.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_97
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80383..80583)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003186763
Uncharacterized protein {ECO:0000313|EMBL:KJL28838.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCNpilot_expt_1000_bf_scaffold_1202_curated_98
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80701..81303
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372882B
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL27044.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1202_curated_99
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81379..81885
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B30E31
Uncharacterized protein {ECO:0000313|EMBL:KGN32414.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
putative protease
SCNpilot_expt_1000_bf_scaffold_1202_curated_100
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82482..83147
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KUF8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM83664.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
neuraminidase; K09807 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_101
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83168..84676)
DNA (1509bp) protein (503aa)
ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034819C8
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hflX; GTPase; K03665 GTP-binding protein HflX
SCNpilot_expt_1000_bf_scaffold_1202_curated_102
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84784..85428
DNA (645bp) protein (215aa)
16S RNA G1207 methylase RsmC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KV73_9MICO
16S rRNA methyltransferase {ECO:0000313|EMBL:KDA05795.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
16S RNA G1207 methylase RsmC
SCNpilot_expt_1000_bf_scaffold_1202_curated_103
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85442..86314)
DNA (873bp) protein (291aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C4383
diaminopimelate epimerase
SCNpilot_expt_1000_bf_scaffold_1202_curated_104
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86350..86793)
DNA (444bp) protein (148aa)
Acetyltransferase YpeA {ECO:0000313|EMBL:KJL36629.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL36629.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
acetyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003454DFD
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1202_curated_105
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86790..87347)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KZB2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ53057.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Bifunctional deaminase-reductase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_106
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87388..88299)
DNA (912bp) protein (304aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9L8_MICTS
SCNpilot_expt_1000_bf_scaffold_1202_curated_107
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88418..89971)
DNA (1554bp) protein (518aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035D1395
2-methylthioadenine synthetase
SCNpilot_expt_1000_bf_scaffold_1202_curated_108
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90050..90808)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036CE792
Regulatory protein RecX {ECO:0000313|EMBL:KJQ53060.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K03565 regulatory protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_109
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(90811..91860)
DNA (1050bp) protein (350aa)
Protein RecA n=3 Tax=Microbacterium RepID=U2YS03_9MICO
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
recA; RecA/RadA recombinase; K03553 recombination protein RecA
SCNpilot_expt_1000_bf_scaffold_1202_curated_110
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92134..92355)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F38802
Uncharacterized protein {ECO:0000313|EMBL:KDA05801.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1202_curated_111
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92372..92680)
DNA (309bp) protein (103aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KZA7_9MICO
Transcriptional regulator ClgR {ECO:0000313|EMBL:KJL18472.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1202_curated_112
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92855..93337)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003004CB1
Damage-inducible protein CinA {ECO:0000313|EMBL:KDA05803.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein; K03743
SCNpilot_expt_1000_bf_scaffold_1202_curated_113
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93334..93909)
DNA (576bp) protein (192aa)
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 {ECO:0000313|EMBL:KJL19499.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KJL19499.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phosphatidylglycerophosphate synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000304950F
SCNpilot_expt_1000_bf_scaffold_1202_curated_114
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93909..94868)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031CC0F3
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88211.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ftsK; DNA segregation ATPase FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_expt_1000_bf_scaffold_1202_curated_115
unknown

Not on your lists

95977..96234
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1202_curated_116
unknown

Not on your lists

96478..96714
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1202_curated_117
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96701..98377)
DNA (1677bp) protein (559aa)
Putative ribonuclease J {ECO:0000313|EMBL:KJL30799.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJL30799.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hydrolase of the metallo-beta-lactamase superfamily; K12574 ribonuclease J [EC:3.1.-.-]
ribonuclease n=1 Tax=Microbacterium barkeri RepID=UPI0002DF2AC3
SCNpilot_expt_1000_bf_scaffold_1202_curated_118
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98442..99419)
DNA (978bp) protein (326aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D793A
SCNpilot_expt_1000_bf_scaffold_1202_curated_119
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99512..100273)
DNA (762bp) protein (254aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KJQ53070.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJQ53070.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CCFFB
short-chain dehydrogenase of various substrate specificities; K07124
SCNpilot_expt_1000_bf_scaffold_1202_curated_120
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100273..100749)
DNA (477bp) protein (159aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E98A87
Displaying items 91-120 of 203 in total

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