ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1202_curated_96

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 79669..80277

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034500AD similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 184.0
  • Bit_score: 190
  • Evalue 1.30e-45
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88575.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 192.0
  • Bit_score: 205
  • Evalue 9.70e-50
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 193.0
  • Bit_score: 165
  • Evalue 1.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCACCCCTCCCCCACGGATCACATGAAAACCCGATTCCCCCTCGCTGCCGGCGCCCTGCTGGCAACGCTGTCCCTCGCCGCGTGCAGCGGCCCCAGCACGCCGGTCGACAAGACCCCCACCTCGACCGCTTCGAAGCCTCCGGCCACGCCGAAGGCCGAGGTGGAGACCGCTCCCGCCGACAAGCCCGCCACGACCGCGCCCGCCGACCGGCCGACCTGCGAGACCATGATCACCAAGGGCACCGTCGAGGCGCTGAAGTCCCAGGGCTGGACCTTCGAGGAGCGCGAGTTCCGCATCGGTGACGTCCTCGTCGAAGGCGGACTCGAGTGCCTCTGGGCCGACTACTCGACGGCATCCGACCACGGCCAGATGTACGCGTGGGGCCCCATCAGCGCCGAGAACTCCCGCACGGCCCAGGCGAGCCTGATCTCGGAGGGCTGGCTGCGCTCGACCTCGAACGGCAAGACGTACATCACCGAGGATCCCGCCTACGCGATCGCCAAGGACGACGACGGGTTCGGCATGACCTACGAGTTCGGCGACGGGTGGGTGAGGTTCGCCGACACGAAGCAGGGACTGCTGCTCGTCGACTGGGGCGAGAAGTGA
PROTEIN sequence
Length: 203
MHPSPTDHMKTRFPLAAGALLATLSLAACSGPSTPVDKTPTSTASKPPATPKAEVETAPADKPATTAPADRPTCETMITKGTVEALKSQGWTFEEREFRIGDVLVEGGLECLWADYSTASDHGQMYAWGPISAENSRTAQASLISEGWLRSTSNGKTYITEDPAYAIAKDDDGFGMTYEFGDGWVRFADTKQGLLLVDWGEK*