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SCNpilot_cont_1000_p_scaffold_266_curated

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_266_curated_1
unknown

Not on your lists

comp(3..185)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_266_curated_2
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(193..1926)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B2FAF7
Uncharacterized protein {ECO:0000313|EMBL:EDM35212.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
SCNpilot_cont_1000_p_scaffold_266_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2095..3066)
DNA (972bp) protein (324aa)
PAP7; acid phosphatase (EC:3.1.3.2)
acid phosphatase, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B41F5A
Metallophosphoesterase {ECO:0000313|EMBL:EHQ25873.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_266_curated_4
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3075..4154)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B772F9
Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74510.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_266_curated_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4202..5794)
DNA (1593bp) protein (531aa)
membrane protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5D2A1
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ29109.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RagB/SusD domain-containing protein
SCNpilot_cont_1000_p_scaffold_266_curated_6
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5815..8826)
DNA (3012bp) protein (1004aa)
TonB-dependent receptor n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAI8_9SPHI
TonB-dependent receptor {ECO:0000313|EMBL:EHQ29108.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor
SCNpilot_cont_1000_p_scaffold_266_curated_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9158..10381
DNA (1224bp) protein (408aa)
histidinol phosphatase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B44FFD
PHP domain protein {ECO:0000313|EMBL:EHQ29103.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
PHP domain-containing protein
SCNpilot_cont_1000_p_scaffold_266_curated_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10614..11474
DNA (861bp) protein (287aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C437_SPHS2
sigma-70 family RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:ETZ23549.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_cont_1000_p_scaffold_266_curated_9
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11529..12521)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HBA4_BACT4
Endo-1,4-beta-xylanase {ECO:0000313|EMBL:KDN56872.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
endo-1,4-beta-xylanase D
SCNpilot_cont_1000_p_scaffold_266_curated_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12528..13580)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QPT2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AII64663.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
beta-xylosidase
SCNpilot_cont_1000_p_scaffold_266_curated_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13580..15916)
DNA (2337bp) protein (779aa)
alpha-xylosidase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] rbh
xylosidase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73640
Glycosyl hydrolase family 31 {ECO:0000313|EMBL:EFV25056.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
SCNpilot_cont_1000_p_scaffold_266_curated_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16150..16452)
DNA (303bp) protein (101aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4P8_9SPHI
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:EHQ28092.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
SCNpilot_cont_1000_p_scaffold_266_curated_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16511..19186)
DNA (2676bp) protein (892aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4Z1_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ28319.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_266_curated_14
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19251..19787)
DNA (537bp) protein (179aa)
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:EDM37463.1}; EC=3.5.4.13 {ECO:0000313|EMBL:EDM37463.1};; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
deoxycytidine triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13]
deoxycytidine triphosphate deaminase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4B8D6
SCNpilot_cont_1000_p_scaffold_266_curated_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19890..20528
DNA (639bp) protein (213aa)
4''''-phosphopantetheinyl transferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B57623
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:EHQ28317.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
phosphopantetheinyl transferase
SCNpilot_cont_1000_p_scaffold_266_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20532..21254
DNA (723bp) protein (241aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; M
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4Y8_9SPHI
SCNpilot_cont_1000_p_scaffold_266_curated_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21251..21958
DNA (708bp) protein (236aa)
Lipolytic protein G-D-S-L family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4Y7_9SPHI
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:EHQ28315.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
G-D-S-L family lipolytic protein
SCNpilot_cont_1000_p_scaffold_266_curated_18
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21955..22626
DNA (672bp) protein (224aa)
Lipolytic protein G-D-S-L family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4Y7_9SPHI
Lysophospholipase {ECO:0000313|EMBL:KIA93221.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
G-D-S-L family lipolytic protein
SCNpilot_cont_1000_p_scaffold_266_curated_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22708..23259
DNA (552bp) protein (184aa)
Nodulation protein L n=1 Tax=Pedobacter sp. BAL39 RepID=A6EA13_9SPHI
Acetyltransferase {ECO:0000313|EMBL:KIC90499.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acetyltransferase
SCNpilot_cont_1000_p_scaffold_266_curated_20
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23334..23732
DNA (399bp) protein (133aa)
cupin n=1 Tax=Pedobacter agri RepID=UPI00029A581B
Uncharacterized protein {ECO:0000313|EMBL:KFC33551.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
cupin
SCNpilot_cont_1000_p_scaffold_266_curated_21
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23740..25170)
DNA (1431bp) protein (477aa)
L-serine dehydratase 1 (EC:4.3.1.17); K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine dehydratase 1 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4Y4_9SPHI
L-serine dehydratase 1 {ECO:0000313|EMBL:EHQ28312.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_266_curated_22
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25327..25581
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3A389
Uncharacterized protein {ECO:0000313|EMBL:KHJ39085.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_266_curated_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25585..25881
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD88_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27114.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_266_curated_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25972..28443
DNA (2472bp) protein (824aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YD87_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27113.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_266_curated_25
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28532..29284)
DNA (753bp) protein (251aa)
Glycosyl transferase family 2 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZZ4_9SPHI
Glycosyl transferase family 2 {ECO:0000313|EMBL:EHQ27836.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
family 2 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_266_curated_26
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29290..30555)
DNA (1266bp) protein (422aa)
Glycosyl transferase group 1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWE9_PEDHD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACU06238.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_266_curated_27
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30652..31185
DNA (534bp) protein (178aa)
transferase hexapeptide repeat containing protein; K03819 putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-]
Serine acetyltransferase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWE8_PEDHD
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ACU06237.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_266_curated_28
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31185..31931
DNA (747bp) protein (249aa)
methyltransferase type 12 n=1 Tax=Cytophagales str. B6 RepID=UPI0003B7406C
Methyltransferase type 12 {ECO:0000313|EMBL:KIA95474.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
type 12 methyltransferase
SCNpilot_cont_1000_p_scaffold_266_curated_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31936..32721)
DNA (786bp) protein (262aa)
Ion channel protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73379
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EHQ28302.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
mechanosensitive ion channel MscS; K03442 small conductance mechanosensitive channel
SCNpilot_cont_1000_p_scaffold_266_curated_30
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33092..34723)
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUU1_9SPHI
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
chaperonin GroEL; K04077 chaperonin GroEL
Displaying items 1-30 of 91 in total

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