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SCNpilot_cont_300_bf_scaffold_2555_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2555_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..265
DNA (264bp) protein (88aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_00049};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Leucine--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=SYL_NITHX
SCNpilot_cont_300_bf_scaffold_2555_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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435..938
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRZ7_NITHX
hypothetical protein; K03643 LPS-assembly lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:ABE61000.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_2555_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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950..1978
DNA (1029bp) protein (343aa)
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABE61001.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABE61001.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
DNA polymerase III, delta subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRZ6_NITHX
SCNpilot_cont_300_bf_scaffold_2555_curated_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2087..2968)
DNA (882bp) protein (294aa)
ParB-like partition protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSB0_9BRAD
ParB-like partition protein {ECO:0000313|EMBL:EAQ37093.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
parB-like partition proteins; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_300_bf_scaffold_2555_curated_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3152..4030)
DNA (879bp) protein (293aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSB2_9BRAD
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:EAQ37092.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein
SCNpilot_cont_300_bf_scaffold_2555_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4027..4779)
DNA (753bp) protein (251aa)
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G {ECO:0000255|HAMAP-Rule:MF_00074}; EC=2.1.1.170 {ECO:0000255|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000255|HAMAP-Rule:MF_00074}; Short=16S rRNA m7G methyltransferase {ECO:0000255|HAMAP-Rule:MF_00074};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RSMG_NITHX rbh
SCNpilot_cont_300_bf_scaffold_2555_curated_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4885..6756)
DNA (1872bp) protein (624aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSB4_9BRAD
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
SCNpilot_cont_300_bf_scaffold_2555_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6927..8303)
DNA (1377bp) protein (459aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
tRNA modification GTPase MnmE n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MNME_NITHX rbh
SCNpilot_cont_300_bf_scaffold_2555_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8407..10473
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRY9_NITHX
Uncharacterized protein {ECO:0000313|EMBL:ABE61008.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hypothetical protein; K06888
SCNpilot_cont_300_bf_scaffold_2555_curated_10
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10609..11520
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LVV6_METRJ
Protein of unassigned function {ECO:0000313|EMBL:AIQ91909.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein
Displaying 10 items

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