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SCNpilot_expt_300_bf_scaffold_256_curated_16

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(14305..15366)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 353.0
  • Bit_score: 603
  • Evalue 2.10e-169
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 353.0
  • Bit_score: 593
  • Evalue 3.80e-167
3-isopropylmalate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKS0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 353.0
  • Bit_score: 603
  • Evalue 1.50e-169

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGAAAATCGCCATATTGCCCGGTGATGGAATCGGTCCCGAAATCGTCGCTCAGGCGGTAAGGGTGCTGGAAGCCCTGCGGAGCGACGGCCTGGGATTCGAGCTGGAGCAGGGATTGCTCGGCGGATGCGCGGTGGACGCGCTGGGCGAGCCGTTCCCTGAAGCCACTCGCCGCCTTGTTGCAGCCGCTGACGCTGCCCTTCTGGGTGCTGTCGGCGGTCCGCGGTATGATGCGCTGCCACGGCAGATGCGGCCGGAACGAGGCCTGCTTGAAATACGCAAGTTTTTGAATTTATTTGCTAACTTGCGGCCGGCCATCCTCTATCCCGAGCTGGCTGCTGTTTCGACGCTTAAACCCGATATCGTGGCGGGGATGGATATACTGATCGTGCGAGAGCTTACCGGCGATATTTATTTCGGCGAGCCGCGCGGAATAGAATGGCGCGACAGCCAGCGCGTCGGTTTCAACACCATGATATACAATGAAGCGGAGATTCGCAGGATTGCGCGAGTGGCATTCCAGGCGGCAGCGAAACGCAATCGCAAGCTTTGCTCCGTGGACAAGATGAATGTGCTCGAATGCACGCAGCTCTGGCGCGATGTTGTCACGGAGACGGGACAGGCGTTTCCAGAAGTGGAACTTTCCCACATGCTCGTGGATAATGCCGCCATGCAGCTCGTGCGCAATCCCCGGCAATTCGATGTCATGGTGACGGGTAATATGTTCGGCGATATTCTTTCGGATGAGGCTTCCATGTTGACGGGTTCCATCGGCATGCTGCCGTCGGCATCGCTGGATGAAAATAATAAGGGGTTGTATGAGCCGATACATGGCTCTGCGCCTGATCTCGCGGGAAAAGATATCGCCAATCCGCTGGCTACCATTCTCTCGGTAGCCATGATGCTGCGTTACACCTTTGATCAGGAGGAGGCGGCAGCACGGATCGAAAATGCGGTCAGGAAAGTATTGGCGGATGGATACCGTACGGCCGATATCTACGAAACAGGTACCAGGAAGATCGGCACCGAGGCCATGGGCGCCGCAGTGCTGGCAAACTTATGA
PROTEIN sequence
Length: 354
MKIAILPGDGIGPEIVAQAVRVLEALRSDGLGFELEQGLLGGCAVDALGEPFPEATRRLVAAADAALLGAVGGPRYDALPRQMRPERGLLEIRKFLNLFANLRPAILYPELAAVSTLKPDIVAGMDILIVRELTGDIYFGEPRGIEWRDSQRVGFNTMIYNEAEIRRIARVAFQAAAKRNRKLCSVDKMNVLECTQLWRDVVTETGQAFPEVELSHMLVDNAAMQLVRNPRQFDVMVTGNMFGDILSDEASMLTGSIGMLPSASLDENNKGLYEPIHGSAPDLAGKDIANPLATILSVAMMLRYTFDQEEAAARIENAVRKVLADGYRTADIYETGTRKIGTEAMGAAVLANL*