name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_256_curated_1
unknown
|
Not on your lists |
comp(3..101)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_256_curated_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
373..1182
|
Zn-dependent protease with chaperone function PA4632 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR8_9PROT
Peptidase M48 {ECO:0000313|EMBL:KIO49059.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
peptidase M48, Ste24p
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1257..2438)
|
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:CCU63492.1}; EC=2.5.1.48 {ECO:0000313|EMBL:CCU63492.1};; EC=2.5.1.49 {ECO:0000313|EMBL:CCU63492.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKT5_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2745..4265)
|
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosos
Amidophosphoribosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLF1_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4387..4896)
|
Colicin V production protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR2_9PROT
Colicin V production protein {ECO:0000313|EMBL:CCU63494.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
colicin V production protein; K03558 membrane protein required for colicin V production
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4929..5687)
|
DedD protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVY7_9PROT
DedD protein {ECO:0000313|EMBL:CCU63495.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sporulation related; K03749 DedD protein
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5662..6987)
|
Dihydrofolate synthase / Folylpolyglutamate synthase {ECO:0000313|EMBL:CCU63496.1}; EC=6.3.2.12 {ECO:0000313|EMBL:CCU63496.1};; EC=6.3.2.17 {ECO:0000313|EMBL:CCU63496.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
FolC bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
Dihydrofolate synthase / Folylpolyglutamate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ98_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7224..8093)
|
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395, ECO:0000313|EMBL:KIO49041.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKT9_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8154..8975)
|
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20]
Tryptophan synthase alpha chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLF7_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8992..10188)
|
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Tryptophan synthase beta chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR6_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10175..10798)
|
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVZ2_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10906..11754)
|
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
tRNA pseudouridine synthase A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJA4_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_13
unknown
|
Not on your lists |
comp(11833..12105)
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_256_curated_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12083..12991)
|
Possible transmembrane protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7R1_NITMU
transmembrane protein; K07288 uncharacterized membrane protein
Possible transmembrane protein {ECO:0000313|EMBL:ABB75210.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_15
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13054..14166)
|
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLG3_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14305..15366)
|
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
3-isopropylmalate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKS0_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15555..16193)
|
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVZ8_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16212..16337)
|
Entericidin EcnAB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Q6_NITMU
entericidin EcnAB
Entericidin EcnAB {ECO:0000313|EMBL:ABB75215.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16385..17794)
|
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU5_9PROT
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17900..19057)
|
Nucleoside:H+ symporter:Major facilitator superfamily n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLG7_9PROT
MFS transporter {ECO:0000313|EMBL:KIO49032.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
major facilitator transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_21
unknown
|
Not on your lists |
19427..19642
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_256_curated_22
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19962..20195
|
TIGR03440 family protein n=1 Tax=Polaromonas sp. CF318 RepID=J2TPC0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20192..21172
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7Q1_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75220.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_24
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria
|
Not on your lists |
21716..22399
|
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000374E618
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_25
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22557..23231
|
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI000366AFC5
Type 11 methyltransferase {ECO:0000313|EMBL:BAO28756.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
methyltransferase type 11
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23586..24344
|
Integral membrane protein TerC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJB3_9PROT
Integral membrane protein TerC {ECO:0000313|EMBL:CCU63511.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
integral membrane protein TerC
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24366..26231
|
hypothetical protein; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU9_9PROT
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26309..26470)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLH5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63518.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26770..27990)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIZ3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62659.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_256_curated_30
unknown
|
Not on your lists |
comp(28002..28262)
|
This feature has no annotations |