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SCNpilot_cont_1000_bf_scaffold_406_curated_27

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(28563..29456)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D8BCE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 571
  • Evalue 7.00e-160
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ92690.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 297.0
  • Bit_score: 515
  • Evalue 6.40e-143
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 293.0
  • Bit_score: 388
  • Evalue 2.60e-105
  • rbh

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCGCCGCCTGAATCTGGATCAGCTTCACACGTTTTCCGAAGTCCTCGACGCGGGGAGTTTCTCCGCGGCCGCCGCGCGGCTCGATCTGTCGCAGCCCGCCGTGAGCTTGCAGGTTCGTCAGTTGGAACAGCGATTGAACGTCCGGCTGGTTGAGCGCGTGGGCAAGCGGCTCAAGCCGACGTCCGCCGGGCTGACGCTGCTGGACCATGCCCGCCGCATCGATGCTGTCGTCGAAGACGCCATGCATGCGCTGTCCAGCCATGCGAGCGGCGAAGTCGGTGAAGTGGCGATCGGAACCGGAGCGACCGCCTGCATTCATTTGTTGCCGCCGATACTGCGAGCGATGCGCAAGCGCCACCCGATGCTCGACATCCGCGTGAGCACCGGGAACACCGACGACGTGGTCGCCGCGGTGACCGAGAATCGGCTCGATATCGGTCTTGTCACCTTGCCCACTGCCGGGCGCAGCCTGCATATCACGCCCGTATTGCGCGACGCGTTCGTCGCCATCGCGCCCGCCGGCGACTCGCACTGGGCGACGGAGGTCACGCCGCAGATGCTCGCCGCGGCACCGATGGTCGCGTTCGAGCCGGGGAGCAGCACCCGGTTGTTGATCGATGAATGGTTTCTCCAAGCGGGATTGCGTGTGCGGCCAGTCATGGCGCTGGGCAGCGTCGAAGCCATCAAGGAAATGGTGGCGGCCGGCTTGGGTTACAGCATCGTGCCCAGGCTTTCCGTCAACGCGGCGCACTACCGGCGGGGCTTGCGTGTCTCGACGCTCACACCGGGGTTGACGAGAACGCTTGCGGTCGTCATGCGCCGCGACAAACCGCTGACACCGGGATTGCGCAGGGTCGCATCGGCACTTGAGGCGTTGGGCGATGCCGCCTGA
PROTEIN sequence
Length: 298
MRRLNLDQLHTFSEVLDAGSFSAAAARLDLSQPAVSLQVRQLEQRLNVRLVERVGKRLKPTSAGLTLLDHARRIDAVVEDAMHALSSHASGEVGEVAIGTGATACIHLLPPILRAMRKRHPMLDIRVSTGNTDDVVAAVTENRLDIGLVTLPTAGRSLHITPVLRDAFVAIAPAGDSHWATEVTPQMLAAAPMVAFEPGSSTRLLIDEWFLQAGLRVRPVMALGSVEAIKEMVAAGLGYSIVPRLSVNAAHYRRGLRVSTLTPGLTRTLAVVMRRDKPLTPGLRRVASALEALGDAA*