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SCNpilot_cont_1000_bf_scaffold_406_curated_28

Organism: scnpilot_dereplicated_Pandoraea_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(29567..31027)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CFE71 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 486.0
  • Bit_score: 925
  • Evalue 3.10e-266
Multidrug transporter {ECO:0000313|EMBL:KHQ92687.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 487.0
  • Bit_score: 817
  • Evalue 7.60e-234
outer membrane protein OprM 1 similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 475.0
  • Bit_score: 442
  • Evalue 1.50e-121

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGAAGACGTTTCGACCCCGCATGCGCGGGATAGCTGCGCCCGGCGTGTGTTTGCTGGCATTGGTCGGCGGATGCACGTTGGCGCCGACCTATGAGCGCCCGGCGGCACCGGTGCCGACCACGTACGAGGCGGCACCGTCGGGCACAGGTGCGCGTCTGGCGCTCGCCGAGCCGCTCGCGGCAGACGCGGATTGGGCCGACGTATTCACCGATCCCGCCTTGCAGACGCTGATTCGCCGCTCGCTCGCGCAGAATCGCGACTTGCGCCTGGCGTCGCTACGGGTGCAGGAAGCGCGTGCGCTGTATGGCATCGAGGCGGCCAATCTGCTGCCGAGCGTGCAGGCAGGCGGCGCATTCTCCCGTCAGCGGTACTCAGGGGCCGCGGGCCAGCCTGAGGGCAGGGGCACCGCCGCAGGTTACGTCGCCAACGACTTACGGGCGACGCTGGGCGTGAGCGCCTTTGAACTCGATTTCTTCGGGCGCGTGCGCAGCTTGAGCGACGCGGCGCTGCAATCGTATTTGGCGAGCGAGGAAGCGCAACGGGCGGCGCAGGTGAGTCTCGTGGCGGAAGTAGCCACGTCCTACATTGGACTCGTGGCCATCGACGAACAGATCGCCTACGCGCGGGAGGTGCTGGCGGCACGCGAGGAGGGCATTCGCGTGGTTCGCCTGCGCGCCGAGCGCGGGCTGATCGACGATCTCGACCTGAATGCCGAGACCACGCAGGTCGAAGTCGCGCGCGCAGCACTCGCCGAGCGCGAGCGGCAACGCAGCGAGATCGTGCACGCGTTGCAGGTCCTGACCGGCGACGTGAGTGCGAAGCCAGTCGCGGCGGCATCGCTCGACGACGCATTCGTCATGCCCGTGGCCGCCGGATTGCCGTCCTCGTTGCTGATACGTCGTCCGGATATTCGGCAGGCGGAGGCGCAACTGCGTGCGGCCAACGCGGATATCGGCGCCGCTCGTGCGGCGTTCTTCCCGTCGATCAAGTTGACGACGGATGTCGGCACTGCCAGTGCGGGGATTGCGGATCTGTTCGGCGCCGGCACCGGTGTATGGTCGTTCCTGCCGCAGATTACCGTGCCGATCTTTACGGGCGGGCGTCACCGGCAAGGGTTGAATCTGGCGAACGTGCGCAAGGAGATGGCCGTTGTGTCGTACGAGCGTGCGATTCAAACGGCGTTTGCCGAAGTGGATGACGCCCTGACCGCGCAAGGGCTGCTATCGCGCCAGTTCCAGGCGCAAAAGCGCGTGTCGGACGGCGAGCGCGAGCGGCTTCGTCTGGCCCATCATCGCTATACCAACGGCGTGGCGAGCTACCTCGAACTGCTCGACGCGCAGCGCAGCGCATTTCACGCGGCGCAACAGTTGATCGATGTGAAGCAGCGAGTACTCGTGAACCATGTGGCGCTGTACCGAGCGTTGGGCGGCGGATGGCAACCGGAGAGCGGCACGTCCTGA
PROTEIN sequence
Length: 487
MKTFRPRMRGIAAPGVCLLALVGGCTLAPTYERPAAPVPTTYEAAPSGTGARLALAEPLAADADWADVFTDPALQTLIRRSLAQNRDLRLASLRVQEARALYGIEAANLLPSVQAGGAFSRQRYSGAAGQPEGRGTAAGYVANDLRATLGVSAFELDFFGRVRSLSDAALQSYLASEEAQRAAQVSLVAEVATSYIGLVAIDEQIAYAREVLAAREEGIRVVRLRAERGLIDDLDLNAETTQVEVARAALAERERQRSEIVHALQVLTGDVSAKPVAAASLDDAFVMPVAAGLPSSLLIRRPDIRQAEAQLRAANADIGAARAAFFPSIKLTTDVGTASAGIADLFGAGTGVWSFLPQITVPIFTGGRHRQGLNLANVRKEMAVVSYERAIQTAFAEVDDALTAQGLLSRQFQAQKRVSDGERERLRLAHHRYTNGVASYLELLDAQRSAFHAAQQLIDVKQRVLVNHVALYRALGGGWQPESGTS*