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SCNpilot_cont_1000_p_scaffold_231_curated

Search features with annotation key words

Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_231_curated_1
Gordonia amicalis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..256
DNA (255bp) protein (85aa)
Para-aminobenzoate synthase, amidotransferase component / Para-aminobenzoate synthase, aminase component (EC:2.6.1.85)
para-aminobenzoate synthase n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0003128AF3
Para-aminobenzoate synthase {ECO:0000313|EMBL:GAC52430.1}; TaxID=1220574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amicalis NBRC 100051 = JCM 11271.;"
SCNpilot_cont_1000_p_scaffold_231_curated_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(287..1141)
DNA (855bp) protein (285aa)
alpha/beta hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF319
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA24884.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_3
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1263..1877
DNA (615bp) protein (205aa)
Thioesterase family protein n=1 Tax=Mycobacterium intracellulare MOTT-64 RepID=H8JRP7_MYCIT
thioesterase family protein
Thioesterase family protein {ECO:0000313|EMBL:CDO31270.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
SCNpilot_cont_1000_p_scaffold_231_curated_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1910..2317
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000371833D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82096.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_p_scaffold_231_curated_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2320..2892)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S663_MICSL
hypothetical protein
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66961.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
SCNpilot_cont_1000_p_scaffold_231_curated_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2920..3825)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003639EF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB44877.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
SCNpilot_cont_1000_p_scaffold_231_curated_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3825..4535)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003639EF5
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66260.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
SCNpilot_cont_1000_p_scaffold_231_curated_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5164..5586)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036C8656
nitrite reductase and ring-hydroxylating dioxygenase erredoxin subunit-like protein
Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase-like protein {ECO:0000313|EMBL:ACZ88776.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_1000_p_scaffold_231_curated_9
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5597..6127)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LZ56_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KDE12368.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_231_curated_10
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6271..6921)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00038239A3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP54122.1}; Flags: Precursor;; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
SCNpilot_cont_1000_p_scaffold_231_curated_11
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6918..7514)
DNA (597bp) protein (199aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E5W9_NOCAS
ECF family sigma-70 type sigma factor {ECO:0000313|EMBL:GAM45325.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
sigU; putative RNA polymerase ECF subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_231_curated_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7591..9693)
DNA (2103bp) protein (701aa)
Adenylate cyclase family 3 (Some protein contain HAMP domain)-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B966_STRRD
Family 3 adenylate cyclase {ECO:0000313|EMBL:EXG79984.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
adenylyl cyclase class-3/4/guanylyl cyclase
SCNpilot_cont_1000_p_scaffold_231_curated_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9690..10364)
DNA (675bp) protein (225aa)
cyclic nucleotide-binding protein n=1 Tax=Nonomuraea coxensis RepID=UPI00035E8ABF
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ETK35649.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Crp/Fnr family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_231_curated_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10614..10952)
DNA (339bp) protein (113aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:CEL18446.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CEL18446.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
ATP-dependent DNA ligase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037322F1
lig; ATP-dependent DNA ligase
SCNpilot_cont_1000_p_scaffold_231_curated_15
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11176..11751)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003739A3E
Uncharacterized protein {ECO:0000313|EMBL:KGN37887.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_231_curated_16
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11744..12226)
DNA (483bp) protein (161aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SF84_9ACTO
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFQ82169.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
activator of HSP90 ATPase 1 family protein
SCNpilot_cont_1000_p_scaffold_231_curated_17
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12223..12573)
DNA (351bp) protein (117aa)
Bacterial regulatory , arsR family protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M7A5Z8_9ACTO
Bacterial regulatory , arsR family protein {ECO:0000313|EMBL:EMP14103.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
ArsR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_231_curated_18
unknown

Not on your lists

comp(12576..12773)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_231_curated_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13180..13914
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL9_PSEUX
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:AEA25136.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13916..15142
DNA (1227bp) protein (409aa)
arsenic transporter n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625A1D
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
arsenical pump membrane protein
SCNpilot_cont_1000_p_scaffold_231_curated_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15153..15893)
DNA (741bp) protein (247aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL7_PSEUX
Phosphoglycerate mutase {ECO:0000313|EMBL:AEA25134.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_22
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15890..16300)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JP64_SACES
Uncharacterized protein {ECO:0000313|EMBL:AHH94429.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_231_curated_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16297..17034)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL6_PSEUX
hypothetical protein; K07164
Uncharacterized protein {ECO:0000313|EMBL:AEA25133.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17034..18161)
DNA (1128bp) protein (376aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL5_PSEUX
NGG1p interacting factor 3 protein, NIF3
SCNpilot_cont_1000_p_scaffold_231_curated_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18158..19261)
DNA (1104bp) protein (368aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Aminotransferase class I and II n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL3_PSEUX
Aminotransferase class I and II {ECO:0000313|EMBL:AEA25130.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19285..20370)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT81_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26299.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20533..20985
DNA (453bp) protein (151aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Protein tyrosine phosphatase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL2_PSEUX
Protein tyrosine phosphatase {ECO:0000313|EMBL:AEA25129.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_p_scaffold_231_curated_28
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20982..21740
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376D3DD
fructosamine kinase
Fructosamine kinase {ECO:0000313|EMBL:AEK43096.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_1000_p_scaffold_231_curated_29
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21894..22556)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AVW2_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83081.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
SCNpilot_cont_1000_p_scaffold_231_curated_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22629..24017)
DNA (1389bp) protein (463aa)
Diacylglycerol O-acyltransferase {ECO:0000256|RuleBase:RU361241}; EC=2.3.1.20 {ECO:0000256|RuleBase:RU361241};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Acyltransferase, WS/DGAT/MGAT n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPK3_PSEUX
acyltransferase
Displaying items 1-30 of 214 in total

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