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SCNpilot_cont_300_bf_scaffold_87_curated

Search features with annotation key words

Displaying items 1711-1740 of 1758 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_87_curated_1711
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1869215..1869535
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000375CB81
HPr family phosphocarrier {ECO:0000313|EMBL:KFC70730.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HPr family phosphocarrier protein; K11189 phosphocarrier protein
SCNpilot_cont_300_bf_scaffold_87_curated_1712
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1869627..1871165
DNA (1539bp) protein (513aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWN9_AZOBR
extracellular solute-binding protein, family 5
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:CCD02298.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1713
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1871396..1872670
DNA (1275bp) protein (425aa)
5-aminolevulinate synthase (EC:2.3.1.37); K00643 5-aminolevulinate synthase [EC:2.3.1.37]
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
5-aminolevulinate synthase n=1 Tax=Methyloferula stellata RepID=UPI0003764E23
SCNpilot_cont_300_bf_scaffold_87_curated_1714
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1872728..1873141)
DNA (414bp) protein (138aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Methyloferula stellata RepID=UPI00037B7989
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
mscL; putative large-conductance mechanosensitive channel transmembrane protein
SCNpilot_cont_300_bf_scaffold_87_curated_1715
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1873381..1876929
DNA (3549bp) protein (1183aa)
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037998EA
Na+/proline symporter {ECO:0000313|EMBL:EIM28717.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
PAS/PAC sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_87_curated_1716
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1877242..1877649
DNA (408bp) protein (136aa)
Transcription elongation factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0U4_9RHIZ
Transcription elongation factor {ECO:0000313|EMBL:EIM29836.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_cont_300_bf_scaffold_87_curated_1717
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1877656..1878492)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQH3_AGRRK
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_300_bf_scaffold_87_curated_1718
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1878576..1878914)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036CFB3C
Uncharacterized protein {ECO:0000313|EMBL:EGP09320.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_1719
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1878939..1879226)
DNA (288bp) protein (96aa)
Integration host factor subunit beta n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1U6_9BRAD
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta
SCNpilot_cont_300_bf_scaffold_87_curated_1720
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1879291..1880310)
DNA (1020bp) protein (340aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-]
Signal peptide peptidase SppA, 36K type n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QT28_METTR
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ACB96497.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1721
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1880465..1882198)
DNA (1734bp) protein (578aa)
30S ribosomal protein S1 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKW4_BEII9
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1722
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1882477..1883508)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WRN4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN27298.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1723
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1883633..1884202
DNA (570bp) protein (190aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PC64_9BRAD
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1724
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1884372..1886240
DNA (1869bp) protein (623aa)
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Rhizobium sp. CF080 RepID=J3CIY5_9RHIZ
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:KFC70753.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ilvG; acetolactate synthase II
SCNpilot_cont_300_bf_scaffold_87_curated_1725
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1886318..1887352
DNA (1035bp) protein (345aa)
Putative extra-cytoplasmic solute receptors (Bug family) n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKY2_MOBAS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_87_curated_1726
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1887354..1888430)
DNA (1077bp) protein (359aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036B2644
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ACB94398.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1727
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1888504..1889211
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E1440A
Uncharacterized protein {ECO:0000313|EMBL:ETX03002.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
isochorismatase hydrolase
SCNpilot_cont_300_bf_scaffold_87_curated_1728
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1889243..1889698
DNA (456bp) protein (152aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Burkholderia sp. RPE64 RepID=R4WWP9_9BURK
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:BAN25530.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1729
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1889695..1890459)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003777A7C
Anti-sigma factor {ECO:0000313|EMBL:ESW81033.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_1730
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1890456..1891016)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KH76_MESAW
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGB43860.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1731
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1891013..1891342)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003622D8D
Amicyanin {ECO:0000313|EMBL:ESW81035.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
amicyanin precursor
SCNpilot_cont_300_bf_scaffold_87_curated_1732
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1891368..1892315)
DNA (948bp) protein (316aa)
UPI0003CE8814 related cluster n=1 Tax=unknown RepID=UPI0003CE8814
Metallophosphoesterase {ECO:0000313|EMBL:ESW81036.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_87_curated_1733
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1892473..1892988
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002FBF09A
Uncharacterized protein {ECO:0000313|EMBL:EIM26057.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_1734
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1893090..1893749
DNA (660bp) protein (220aa)
DSBA oxidoreductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IGE7_BEII9
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ACB94396.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1735
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1893991..1897449
DNA (3459bp) protein (1153aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000378A288
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Chromosome segregation protein SMC
SCNpilot_cont_300_bf_scaffold_87_curated_1736
unknown

Not on your lists

comp(1897527..1898030)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_87_curated_1737
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1898042..1899139)
DNA (1098bp) protein (366aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Rhizobium sp. CF080 RepID=J3BXV4_9RHIZ
Luciferase family protein {ECO:0000313|EMBL:EUB98422.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
luciferase-like monooxygenase
SCNpilot_cont_300_bf_scaffold_87_curated_1738
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1899136..1900473)
DNA (1338bp) protein (446aa)
Arabinose efflux permease family protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GZD1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AJC23114.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
major facilitator superfamily transport protein
SCNpilot_cont_300_bf_scaffold_87_curated_1739
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900548..1901030)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000366F8E8
Transcriptional regulator {ECO:0000313|EMBL:EJE51706.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_87_curated_1740
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1901287..1901670
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000367E8CA
hypothetical protein; K02116 ATP synthase protein I
Uncharacterized protein {ECO:0000313|EMBL:ACK52705.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Displaying items 1711-1740 of 1758 in total

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