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SCNpilot_cont_300_bf_scaffold_87_curated

Search features with annotation key words

Displaying items 1741-1758 of 1758 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_87_curated_1741
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1901704..1902465
DNA (762bp) protein (254aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMM5_METSB
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1742
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1902517..1902744
DNA (228bp) protein (76aa)
H+transporting two-sector ATPase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F0F1 ATP synthase subunit C n=1 Tax=Methyloferula stellata RepID=UPI00036BF9F2
H+transporting two-sector ATPase C subunit {ECO:0000313|EMBL:KFC75257.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1743
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1902821..1903363
DNA (543bp) protein (181aa)
F0F1 ATP synthase subunit b (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000372E01C
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1744
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1903374..1903862
DNA (489bp) protein (163aa)
H+-transporting two-sector ATPase, B/B' subunit; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
F0F1 ATP synthase subunit B n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037F8893
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1745
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1904028..1904771
DNA (744bp) protein (248aa)
Metallophosphoesterase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20ZU2_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KGM53713.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_87_curated_1746
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1904787..1906190
DNA (1404bp) protein (468aa)
Serine/threonine protein kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM45_9BURK
Serine/threonine protein kinase {ECO:0000313|EMBL:KIF82933.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
serine/threonine kinase rbh
SCNpilot_cont_300_bf_scaffold_87_curated_1747
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1906192..1907736)
DNA (1545bp) protein (515aa)
Glycosyl transferase family 39 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IF17_XANP2
Glycosyl/arabinosyl/mannosyl transferase {ECO:0000313|EMBL:GAN78034.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
glycosyl transferase family protein
SCNpilot_cont_300_bf_scaffold_87_curated_1748
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1907860..1908954
DNA (1095bp) protein (365aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Glycosyl transferase, group 2 family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J050_POLGS
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ADZ71885.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1749
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1909031..1909258
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035D9F81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF88382.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1750
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1909270..1910268)
DNA (999bp) protein (333aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=LPXK_METNO rbh
SCNpilot_cont_300_bf_scaffold_87_curated_1751
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1910372..1911664)
DNA (1293bp) protein (431aa)
3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Three-deoxy-D-manno-octulosonic-acid transferase domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QJQ0_METTR
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EIM27816.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1752
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1911661..1912422)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV25_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67241.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein; K09778 hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_1753
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1912450..1912692)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N149_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41218.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_87_curated_1754
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1912798..1913628)
DNA (831bp) protein (277aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QJQ2_METTR
Inositol monophosphatase {ECO:0000313|EMBL:ACB94564.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1755
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1913888..1917067)
DNA (3180bp) protein (1060aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VFT1_RHOPX
Bradyrhizobium elkanii strain UASWS1015 Contig184, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45228.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_300_bf_scaffold_87_curated_1756
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1917106..1918344)
DNA (1239bp) protein (413aa)
hemolysin secretion protein D n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344D537
heavy metal efflux pump, HlyD family secretion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHP92358.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
SCNpilot_cont_300_bf_scaffold_87_curated_1757
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1918575..1919897)
DNA (1323bp) protein (441aa)
Carbohydrate-selective porin OprB n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZEI5_METPB
carbohydrate-selective porin OprB; K07267 porin
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ACB81049.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_300_bf_scaffold_87_curated_1758
unknown

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1920098..1920223
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying items 1741-1758 of 1758 in total

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